Trifolium pratense (red clover): 123899636
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Entry
123899636 CDS
T08949
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03420
Nucleotide excision repair
tpra04120
Ubiquitin mediated proteolysis
tpra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123899636
04120 Ubiquitin mediated proteolysis
123899636
09124 Replication and repair
03420 Nucleotide excision repair
123899636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123899636
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123899636
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
123899636
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
123899636
Multi subunit type E3
SCF complex
Ring finger protein
123899636
Cul2 complex
123899636
Cul3 complex
123899636
Cul4 complex
123899636
Cul7 complex
123899636
Cul8 complex
123899636
Cul9 complex
123899636
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
123899636
TCR (transcription coupled repair) factors
Cul4-CSA complex
123899636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
CCG
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
123899636
NCBI-ProteinID:
XP_045806769
LinkDB
All DBs
Position
LG7:50618851..50622696
Genome browser
AA seq
119 aa
AA seq
DB search
MATLDSDVPMVPAGESSCCSHGASSSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHI
MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggcgacactcgattccgacgttccaatggttcccgccggcgagagctcctgctgctct
cacggtgcctcttcttcatccaagaagcctaagcgattcgagatcaagaagtggaatgcc
gtttctctttgggcttgggatattgttgttgataattgcgctatctgcaggaatcatatc
atggatctctgcattgagtgtcaggcaaaccaggctagtgctaccagcgaggaatgcaca
gttgcttggggggtttgtaaccatgcttttcacttccattgcataagtcgatggttgaag
actcgtcaagtttgtccactagataacagtgagtgggagtttcagaaatatggtcactag
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