KEGG   Trifolium pratense (red clover): 123899636
Entry
123899636         CDS       T08949                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
tpra  Trifolium pratense (red clover)
Pathway
tpra03420  Nucleotide excision repair
tpra04120  Ubiquitin mediated proteolysis
tpra04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tpra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123899636
   04120 Ubiquitin mediated proteolysis
    123899636
  09124 Replication and repair
   03420 Nucleotide excision repair
    123899636
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tpra04121]
    123899636
   03400 DNA repair and recombination proteins [BR:tpra03400]
    123899636
Enzymes [BR:tpra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     123899636
Ubiquitin system [BR:tpra04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   123899636
  Multi subunit type E3
   SCF complex
    Ring finger protein
     123899636
   Cul2 complex
     123899636
   Cul3 complex
     123899636
   Cul4 complex
     123899636
   Cul7 complex
     123899636
   Cul8 complex
     123899636
   Cul9 complex
     123899636
DNA repair and recombination proteins [BR:tpra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      123899636
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      123899636
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 CCG zf-C3HC4_2 zf-RING_11 zf-C3HC4 zf-RING_16
Other DBs
NCBI-GeneID: 123899636
NCBI-ProteinID: XP_045806769
LinkDB
Position
LG7:50618851..50622696
AA seq 119 aa
MATLDSDVPMVPAGESSCCSHGASSSSKKPKRFEIKKWNAVSLWAWDIVVDNCAICRNHI
MDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 360 nt   +upstreamnt  +downstreamnt
atggcgacactcgattccgacgttccaatggttcccgccggcgagagctcctgctgctct
cacggtgcctcttcttcatccaagaagcctaagcgattcgagatcaagaagtggaatgcc
gtttctctttgggcttgggatattgttgttgataattgcgctatctgcaggaatcatatc
atggatctctgcattgagtgtcaggcaaaccaggctagtgctaccagcgaggaatgcaca
gttgcttggggggtttgtaaccatgcttttcacttccattgcataagtcgatggttgaag
actcgtcaagtttgtccactagataacagtgagtgggagtttcagaaatatggtcactag

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