Trifolium pratense (red clover): 123899973
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Entry
123899973 CDS
T08949
Name
(RefSeq) xanthine dehydrogenase 1-like
KO
K00106
xanthine dehydrogenase/oxidase [EC:
1.17.1.4
1.17.3.2
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00230
Purine metabolism
tpra00232
Caffeine metabolism
tpra01100
Metabolic pathways
tpra01110
Biosynthesis of secondary metabolites
tpra01232
Nucleotide metabolism
tpra04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
123899973
09110 Biosynthesis of other secondary metabolites
00232 Caffeine metabolism
123899973
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
123899973
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tpra04147
]
123899973
Enzymes [BR:
tpra01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
123899973
1.17.3 With oxygen as acceptor
1.17.3.2 xanthine oxidase
123899973
Exosome [BR:
tpra04147
]
Exosomal proteins
Exosomal proteins of breast milk
123899973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MoCoBD_2
MoCoBD_1
FAD_binding_5
Fer2_2
Ald_Xan_dh_C
CO_deh_flav_C
Fer2
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-GeneID:
123899973
NCBI-ProteinID:
XP_045807205
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All DBs
Position
LG7:53898573..53909679
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AA seq
1363 aa
AA seq
DB search
MGSLKKMDSVEQDLQVSSKDVPILYVNGVRRVLPDGLAHFTLLEYLRDIGLTGTKLGCGE
GGCGACTVMVSHYDTNLRKTLHYAVNACLAPLYSVEGMHVITVEGLGSCRLGLHPIQESL
ARTHGSQCGFCTPGFVMSMYALLRSSQSPPSEEQIEECLAGNLCRCTGYRAIVDAFRVFA
KTNDILYTGVSSSSLQEGQSVCPSTGKPCSCNLNSVNDKCAVSVDRYKPTSYNEVDGTNY
TEKELIFPPELLLRKPTFLNLTGFGGLMWYRPLTLQHVLDLKAKYPDAKLLVGNTEVGIE
MRLKRIQYPVLVSVMHVPELNVLDATDDGIEIGAAVRLSILLNFFRKVVTERAAHETSSC
KAFIEQLKWFAGSQIRNVSSIGGNICTASPISDLNPLWMAARAKFRIIDSKGNIKTVLAE
NFFLGYRKVDLAYDEILLSVFLPWNRTFEFVREFKQSHRRDDDIAIVNAGIRVHLQENSE
NWVVADASIFYGGVAPYSLPAIKTKEFLIGKIWNQDLLQNALKILQKDIILKEDAPGGMV
EFRKSLTLSFFFKFFLWVSHQMDGIKESIPLSHLSAVHSVHRPPVTGSQDYEIMKHGTSV
GSPEVHQSSRLQVTGEALYADDTPMPPNGLHAALVLSRKPHARILSIDDSVARSSPGFAG
LFLAKDVPGDNMIGAVVADEELFAVEYITCVGQVIGVVVADTHENAKIAARKVHVEYEEL
PAILSIQDAINARSFHPNTEKHMSKGDVDHCFQSGKCDRIIEGEVQIGGQEHFYLEPNSS
VIWTLDGGNEVHMISSTQAPQKHQKYVSHVLGLPMSKVVCKTKRIGGGFGGKETRSAFIA
AAVSVPSYLLNRPVKITLDRDVDMMITGQRHSFLGKYKVGFTNEGKVLALDLEIYNNAGN
SLDLSLAILERAMFHSDNVYEIPNVRIMGNVCFTNFPSNTAFRGFGGPQGMLITENWIQR
IAVELNMSPEVIREINFQGEGSLLHYGQILEHCPLSQLWNELKLSCDFVKTREEVDQFNA
DNRWKKRGIAMVPTKFGISFTTKFMNQAGALVNVYTDGTVLVTHGGVEMGQGLHTKVAQI
AASAFNIPLSSVFISDTSTDKVPNSSPTAASASSDMYGAAVLDACEQIMARMEPIASRHN
FNSFTELVIACYMERIDLSAHGFYITPDIGFDWTTGKGKPFRYFTYGAAFAEVEIDTLTG
DFHTRAANIFLDLGYSLNPAIDVGQIEGAFVQGLGWVALEELKWGDGAHKWIPSGWLNTC
GPGAYKIPSINDVPLKFNVSLLKGHPNVKAIHSSKAVGEPPFFLASAAFFAIKDAIRAAR
VEMGCTDWFPLDSPATPERIRMTCLDEITSSLVNSDFRPKLSV
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgggatcattgaagaagatggattcggtggaacaagatttgcaggtttcttcaaaagac
gttcctatattatacgttaatggtgttcgtagagttttacctgatggattagctcatttc
actctacttgaatatctcagagatataggcctgacagggactaaactaggctgcggtgaa
ggtggttgtggagcttgcactgttatggtttctcattatgatacaaatttgaggaaaacc
ttacactatgctgtcaatgcttgcttagcacctctgtattctgttgaagggatgcatgtg
attacagtggagggacttggaagctgcaggctcggattgcaccctatccaggaatctctg
gctcgtactcatggttcacaatgtggattttgtacacctggttttgtcatgtccatgtat
gcgttattgcggtcaagtcaatcaccacctagtgaagaacaaattgaagaatgccttgct
ggaaatttatgccgatgcaccggttacagagcaatagttgatgcatttcgagtctttgcc
aaaactaatgatatcttatatactggcgtttcttcatctagccttcaagaaggccagtct
gtttgcccatcaaccgggaaaccttgttcttgtaatttaaacagtgtaaatgataaatgt
gcagtcagtgttgatagatataaacctacttcatataatgaagtagatgggaccaactat
acagaaaaggaacttatttttcctcctgaactgttgttaaggaaaccaaccttcttaaat
ttgactggatttggtgggctaatgtggtatcgacctttaacacttcagcacgtattggat
ttaaaagccaaatatcctgatgcaaagttgctagttggtaatactgaggtaggaattgag
atgagactaaagagaatacaatatccagttttggtttctgtgatgcatgtgccagaacta
aatgttttggatgctacggatgatggcatagagataggtgctgcagtgagattatccatt
ctcttgaatttttttaggaaggtcgtgacggaacgagctgctcacgaaacttcatcttgt
aaagcctttattgagcaactgaaatggttcgctggatcacagataagaaatgtttcatca
attgggggaaatatatgtactgccagcccaatatcagacttgaatcctctctggatggca
gctagagcaaagtttcgaattattgactcaaaaggaaacatcaagactgtactggcagaa
aatttcttcctgggttatcgcaaggtggatttggcatacgatgaaattctgctgtccgta
ttcttgccatggaatagaacctttgagttcgtgagagaatttaaacagtcccataggagg
gatgatgatattgcaattgtaaatgcaggtattcgcgttcatcttcaggaaaatagtgaa
aattgggttgttgctgatgcatcaattttttatggtggggtggctccatattcacttcct
gcaataaaaactaaggaatttctcattggaaagatttggaaccaagatctgttgcaaaat
gcattgaaaattctgcaaaaggatataatacttaaggaagatgctcctggtggaatggta
gagttccggaaatctttgactctgagtttcttttttaaattttttctatgggtgtctcat
caaatggatggcatcaaagagagtataccattatcccatctatctgcagtgcactcagtc
caccggccaccagttacaggatctcaggactatgaaattatgaagcacggaacatctgtc
ggttctcctgaggttcatcaatcttcaagacttcaggttacaggagaagcattatatgct
gatgacacaccaatgcctccaaatggcttgcatgctgccttagttttgagtagaaaaccc
catgcccgaatactttcaattgatgattcagtggccaggtcttcacctggatttgcgggt
ttgtttctagccaaagatgtaccgggtgataatatgattggagcagttgttgctgacgag
gagctttttgccgtagaatatatcacttgcgttggtcaggtaataggagttgttgtggct
gatactcatgaaaatgcaaagatagcagcacgaaaagttcacgttgaatatgaagagctc
ccagctatcttgtcaatacaggacgctatcaatgctagaagttttcatcccaacacagaa
aagcatatgagtaaaggtgatgttgatcactgttttcagtcaggcaagtgtgacagaata
attgaaggggaagttcagataggaggtcaggaacacttttatctggagccaaatagcagt
gtgatatggacattggatggtggaaatgaagttcatatgatatcatctactcaagcccct
cagaagcaccagaaatatgtttctcatgttcttggtctccccatgtcaaaggtagtttgc
aaaacaaagcgaattggtggtggatttgggggaaaggagacaagatcagcttttattgct
gctgcagtttcagttccatcgtatctattaaatcgaccagtgaaaatcacactggatcga
gatgtagacatgatgataactgggcaacgccatagttttttaggaaagtataaggttgga
tttacaaatgaagggaaggtgcttgcactggatcttgaaatttataacaatgctggaaat
tcactggatttgtcacttgctatccttgaacgtgctatgtttcattcagataatgtgtat
gaaataccaaatgtgaggataatgggaaatgtttgcttcactaatttccccagcaacact
gcttttcgtggatttggtggccctcaaggcatgcttattaccgaaaactggattcagagg
attgctgtagaactcaatatgagtccagaagtgataagggaaattaattttcaaggtgaa
gggtcccttttgcattatggccaaatacttgagcactgccctctatcccagctatggaac
gaactgaagttatcttgtgactttgtaaagacacgtgaagaagttgaccagttcaatgct
gacaaccgctggaaaaagcgtggcattgctatggttcctactaagtttggtatatccttt
acaacgaagtttatgaaccaggcaggtgctctggttaatgtctatacggatggaactgtc
ttagttacccatggaggtgtggagatgggacaaggattacatacaaaagttgctcagatt
gctgcatcagctttcaatatcccccttagttctgtctttatatcagatacaagtactgat
aaggttcctaattcttctccaacagcagcttctgcaagttctgatatgtatggagcagcg
gttttagatgcatgtgagcaaataatggcacgcatggaacctattgcttctcgacataac
ttcaactcatttactgagctagttattgcatgctatatggagcgaatagacctttcggcc
catggattttatattacacctgatattggttttgattggaccacgggtaaaggaaaacct
tttaggtatttcacttacggggctgcatttgctgaggttgaaattgataccttgactgga
gattttcacactagagcggcaaacatatttttggatcttggttattctctgaatccagcg
atagatgttggccagatcgaaggagcttttgttcaaggtttgggctgggttgctttagaa
gaacttaaatggggagatggagcacataaatggatcccctctgggtggcttaacacttgt
ggacctggagcttataaaattccttctataaatgatgttcccttgaaatttaatgtctca
cttttgaagggtcatccaaatgtaaaggcaatccattcatctaaagcagttggcgagcct
ccgtttttcctagcatcagctgcattctttgccatcaaggatgccatcagagctgcacga
gttgaaatggggtgcaccgactggtttcctcttgatagcccagctaccccagagagaatt
aggatgacttgtttagacgaaattacatcatcgcttgttaactcagatttccgccccaaa
cttagtgtttga
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