Trifolium pratense (red clover): 123904923
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Entry
123904923 CDS
T08949
Name
(RefSeq) transcription factor PIF1-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
123904923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpra03000
]
123904923
Transcription factors [BR:
tpra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
123904923
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Ribosomal_S20p
Motif
Other DBs
NCBI-GeneID:
123904923
NCBI-ProteinID:
XP_045810481
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Position
LG1:46402815..46417819
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AA seq
547 aa
AA seq
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MFSEFNFNFLFHFNSVQHKRSKMNHCVPDFDIHHIDKEDEDYHVHLSKKPSTQQDDEIME
LLWQNGQVVMQSQNHRQFRKPPSPAARNHKEIRSSDAENYEHLFMQEDEMASWLFDSMNE
DPPFNRQDFSTESLFHPNGGAVIQATASRPPIHPMRKPEQTVNRNHGNVRNEPGTSSSSM
IIAAGRESTVVDSCDTPIVTAKTYRLSETIRSTAETGFVSVSTGGKAATTNGGTTMMDMT
VTSSPDCSSGSGEPGQRKSELDRKRKRRETEESEFQSEDVVSNLLVAWWAMLKSGRGEQV
CGGGKSTTTVGQDVDFECQEGKKQVRGSTSSTKRSRAAEVHNLSERKRRDRINEKMKALQ
ELIPQCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGIQQFMPTMGMGVGMG
LGMEMGMNRPVMPFPNMLASYPLPAATVAAQFGPRFGMPPFHMPHVPAAPDLTRMQAENQ
SDNPLNSIGTLPPDQSRIPNPNSTDPYQQYLGPHQVQQLMQAMNQQNVNRPGTSGNQDNP
QKHHQSG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgttttcagaatttaattttaattttctatttcatttcaattcagttcaacacaagaga
agcaaaatgaatcactgtgtaccagatttcgatattcatcatatcgacaaagaagatgaa
gattatcatgtacatctctcaaagaaaccttcaacgcaacaagacgatgagattatggaa
ctgttatggcaaaacggtcaagttgtgatgcaaagccaaaaccaccgccaattcagaaaa
ccgccatcaccggcggcaaggaatcataaagagattcgatcttccgatgcagagaattac
gaacacttgttcatgcaagaagatgaaatggcatcgtggcttttcgattccatgaatgaa
gatcctcctttcaaccgtcaagatttcagcacagaatcactttttcatccaaacggcggt
gctgttatacaagcaacggcttctcggcctccgattcatccgatgaggaagccggaacag
acggtgaataggaaccacggtaatgtgaggaacgaaccaggcacttcttcgagttcgatg
attattgcggcggggagggaatcaacagtggtcgattcatgtgatacgccgatcgtgacg
gcgaagacatatagattatcggaaacgatcaggagcacggcggaaactggatttgttagt
gtgagtacaggaggaaaagcggcgacaacgaatggcggaacgacgatgatggatatgaca
gtgacgtcatcgcccgattgttcaagcgggagtggtgaaccgggtcagagaaaatcggag
ttggaccggaaaaggaaacgtcgtgaaacggaggaatctgagtttcagagcgaggatgtg
gtttcaaacctactggttgcatggtgggcaatgttgaaaagcggcagaggcgaacaggtt
tgtggcggtggaaagagcaccacaacggtgggtcaggatgttgattttgaatgtcaagaa
ggaaaaaaacaagtccgtggatctacatcatctacaaagagatcccgagctgcagaggtt
cataatctctcagagaggaagcgtcgagataggattaatgaaaagatgaaagctttgcaa
gaacttataccgcagtgcaacaagtctgacaaagcttcaatgttggatgaagcaatcgaa
tacttgaagtcattgcagctacaagtgcagatgatgtccatgggatgtggcatggtacct
atgatgtttcctggaatccaacagtttatgccgacgatggggatgggagtgggaatgggt
ttggggatggaaatgggaatgaacagaccagtgatgccatttcctaacatgttagctagt
tatcctttaccagcagcaacagtagctgctcaatttggaccaaggttcggtatgcctcct
ttccatatgccccatgttcctgcagcacctgatttaaccagaatgcaagcagaaaatcaa
tcagataacccccttaactccattggaactctgcctccagatcaatcacgcatcccaaac
ccaaactccaccgatccttaccagcaatacctaggtccccaccaggtgcagcaattaatg
caggcaatgaaccagcaaaatgtcaacagaccaggtaccagtgggaaccaagataatcct
caaaagcatcatcagtcaggttag
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