Trifolium pratense (red clover): 123906016
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Entry
123906016 CDS
T08949
Name
(RefSeq) 4-coumarate--CoA ligase 2-like isoform X1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra00130
Ubiquinone and other terpenoid-quinone biosynthesis
tpra00940
Phenylpropanoid biosynthesis
tpra01100
Metabolic pathways
tpra01110
Biosynthesis of secondary metabolites
Module
tpra_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
tpra_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
123906016
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
123906016
Enzymes [BR:
tpra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
123906016
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Motif
Pfam:
AMP-binding
AMP-binding_C
DUF6265
Motif
Other DBs
NCBI-GeneID:
123906016
NCBI-ProteinID:
XP_045811797
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Position
LG2:complement(42516528..42526287)
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AA seq
575 aa
AA seq
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MLSLAPSIDAKQTTTTEVSTDSVVINQQKQKPSHDDYDSTNHIFKSKLPDIPISNHLPLH
TYCFQKLPEISDRPCLIVASTGKTYTYAETYLQCRKIAAGLSKLGIQKGDVIMILLQNSA
EFVLSFLAASMIGAVATTANPFYTSAEIFKQIAVSKTKLIITQAMYVDKLKQNEEKYESI
DFKIITIDEPPVNCLHFSVISEANEDQLPEVEFDPEDAVALPFSSGTTGLPKGVILTHKS
LTTSVAQQVDGENPNLYLTTEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLIMHKFEIGT
LLGLIQKHKVTVAMVVPPLVLALAKNPSVAEFDLSSIRLVLSGAAPLGKELEETLHNRIP
QAVLGQGYGMTEAGPVLSMSLGFAKHPLPVSSGSCGTVVRNAELKVLDSETGRSLGYNQP
GEICIRGQQIMKGYLNDENATKTTIDEEGWLHTGDVGYIDDNDEIFIVDRVKELIKFKGF
QVPPAELEGLLVSHPSIADAAVVPQKDVAAGEVPVAFVVRSNGLDLTEEAVKEFIAKQVV
FYKRLHKVYFIHAIPKSPAGKILRKDLRAKLESTT
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcattagctccttctattgatgctaaacaaaccactactacagaagtctctaca
gattctgttgtgattaaccaacaaaaacaaaaaccctctcatgatgattatgattctact
aatcatatttttaaatctaaattaccagatataccaatatctaaccacctcccacttcac
acctactgcttccaaaaacttcctgaaatctccgatcgaccttgtctcatcgtcgcttcc
accggaaaaacatacacatatgcagaaacttatctccaatgtcgaaaaatcgcggccggt
ttatccaaattaggaatccaaaaaggagatgtaatcatgattctacttcaaaattcagct
gaatttgttctctccttcctcgccgcctccatgatcggtgcagttgccaccactgctaat
cctttctacaccagcgccgagatcttcaaacaaatagctgtttccaagacgaagctgatt
atcacacaagcaatgtacgttgataaactgaaacagaacgaagagaagtatgaatcaatt
gatttcaagataatcactattgatgaaccgccggtgaattgtttacatttctcggtgatt
tctgaagcaaacgaagatcaattaccggaagttgaattcgatccagaagacgcggtggcg
cttccattttcttccggaacaacaggattacctaaaggagtgattctaacgcataagagc
ttaacaacaagcgttgctcaacaagtcgatggagagaatccgaatctgtatttaacaact
gaagatgttcttctttgtgttcttccattgtttcatatattttcacttaacagtgtgcta
ttgtgcgcactgagagcagggagtgctgttctgataatgcataaattcgagatcggaacg
ttgcttggtcttatacagaaacataaagtgacggtggcgatggttgttccgccgctagtt
ttggcgttagcgaagaatccttcggtggcggaatttgatcttagttcaatacggttggtg
ctttcaggagccgcgccgttagggaaggagcttgaagaaacgcttcataaccgaattcct
caagccgttttgggacagggttacggtatgacagaggcaggcccagtactatccatgtct
ttgggttttgcaaagcatccattgccagtaagctcaggttcatgtggcacagttgtaaga
aatgcagagcttaaagttcttgactctgaaactggtcgttctcttggttataatcaacct
ggtgaaatttgcatccgtggccaacaaatcatgaaaggatatttgaatgatgagaatgca
acaaaaactactattgatgaggagggttggcttcatactggtgatgttggatatatagat
gacaatgatgagattttcatcgttgacagggtgaaagaactcatcaaattcaaaggcttc
caagtgccccctgctgaacttgaaggccttcttgtaagccatccatctattgcagatgca
gctgtcgtcccgcaaaaagatgttgcagctggtgaagttcctgttgcctttgttgtaaga
tcaaatggacttgatctaactgaagaagctgtaaaggaatttatagctaaacaggttgtg
ttttataaaagactgcacaaagtttatttcattcatgcaattcccaagtctccagctggg
aagatactgaggaaagacctcagagcaaagttagaaagtaccacttaa
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