Trifolium pratense (red clover): 123906644
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Entry
123906644 CDS
T08949
Name
(RefSeq) nuclear pore complex protein GP210 isoform X1
KO
K14314
nuclear pore complex protein Nup210
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123906644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tpra03019
]
123906644
Messenger RNA biogenesis [BR:
tpra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123906644
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_GP210_15th
Ig_GP210_16th
Big_2
Ig_NUP210_1st
Ig_NUP210_7th
Ig_NUP210_5th
Ig_NUP210_16th
Ig_NUP210_3rd
Ig_NUP210_2nd
Ig_NUP210_15th
Ig_NUP210_9th
Invasin_D4
Ig_NUP210_4th
Motif
Other DBs
NCBI-GeneID:
123906644
NCBI-ProteinID:
XP_045812555
LinkDB
All DBs
Position
LG2:6506044..6531006
Genome browser
AA seq
1960 aa
AA seq
DB search
MSKKKNKNMALILLSSVIMVISIVELAAASSPPHASSGPHIADVNLLLPPKMTFPVEYRL
QGSDGCFKWSWDHHDILSVLPEYNSSNKCSTSARLRSIAPYSGRKETAVYATDVKTGIVI
RCKVFIDNISRIQIFHNSIKLDLDGLATLHVRAFDSEENVFSSLAGLQFMWSLMPEANGL
PYRLVNVPIKDSPLSDCGGLCGDLDIQIKLEDDGVFSDLFVVKGIEIGHEIVSVHLLEPQ
LQNMADEILLTVAEAMSLEPPSPVFVLVGAVVPYTLKVIRGNIPQVVTLPSPHHQWSASN
DSVAQVDSKTGLAYAWNLGMTAITVEDTRVAAHVQVSSLNVVLPAYLGLYITPLSSSGDP
VEGIKSIPLMARWYVVSGRQYLIQIKVFAHAHDEQEIYITENDDVNVYDYRSDCWRTVPV
SNDIAFKHGWRNTKLLKAYSQGHGNLTASVSYPGGADDKKEIITVAQEVMVCDQVKFTLG
NEGGVILLPWAPGVHQDAKLKAVGGCAKAVSDYKWLSSDISTVSVSASGTIQAKKPGKAT
IKVISVYDSLNYDEVLVEVSIPSSMVMLHNFHVETVIGSRLQAAVTMKTSNGAFFYRCDA
FNSLIKWKAGSESFVVVNASQESSYLETLPNSQVHPSDEGFPCSWTHIYASNTGQAIIRA
TLSLEYHQFSHAPVVLKASLRIAAYLPFIVRQAGDGNHFGGYWLDLAQAENNKQLHSLEE
LDLVPGTNLDLLLVGGPEPWNKHVDFIESVDVLGGENDLSDGVLVHQISDNSRTLYRVLC
QRLGTFKLLFKRGNLVGDDHRLPSVAEALLPVICSIPSSIVLIADEPVNEYEIIRASAQA
ERSSRRLRDNPITVANGRTIRISAAGISASGEAFANSSSLSLKWELGSCEGLAYWDYAFN
IVKSSDWERFLVLQNESGLCIVRATVTGFLDGLGDGTFHQFSQTENVLTDAIRLQLVSML
RVDPEFSLIYFNPNAKVNLSITGGSCFLEAVTNDSQVVEVTQPTTGLECHQLSLSPKGLG
IANLTLYDMGLTPPLRASALVQVADIEWIQIMSGEEISLMEGSLQTIDLLAGTNGGNNFH
ASQFVYMNLHVHVEDTIIELLDTDSLSSHVGRHVNAPSFKIKGRYLGITTLYVSAMQHSG
HVVQSQAIRVEVYKAPRIHPHEIFLLPGASYVLTVEGGPSLGVHVEYAVENDKIASIDRY
TGRLLAISTGNTTIIASVFVNGNTVICEARSVLKVGVSSTIKLHMQSEQLGVGCKLPIYP
LFPEGNLFSFYELCKSYQWTIEDEQVLSFKVAESLHGEKYGTASEDSQVGGYFDENDIGF
INVLYGRSAGKTKVALSFSCEFSTSGSKTQSRLYSSSLSVTVVPDLPLALGLPITWILPP
YYTTTSLLPSSSESYYDGQNHKGTIKYSLLSSIDKNALQNDAVFIDGDKIKTSESNNLAC
IQAKDRTTGRIEIASCVKVSEVTQVRIASKEVLFKVIDLAVGAEFDLPTTFYDTLGNPFY
EAYNAVRVYAETNYPDVLAINKTADGKGNIHIKAIRHGKALVRVAISEAQQKSDYVLIRV
GAHVYPRNPVLHIGSPLNLSIRGLNDKVSGQWVTTNESVISVDALSGVAKAIGEGSAQVY
FHYERSKKLQTTITVLKGHSISVDAPKGMLTNVPYPTKGYNFSVKFSSTTYGESLDAPGG
NKIISFDCRVDPPYVGYVEPWLDLDTGNSYCVFFPYSPEHLVHSIPKSEGTRPDVSVSIY
ASLKEHEHVLGSASALFIGGFSIMEMGKDPMQLSLTPDSNKTYITIVGNTDVEIHWNRRD
LIMIVPISKDDFGVRGFARYEVKLLKGERFKDKIIITLPTNGQRMEIGITHEPEPDEKAL
SNVAINKTLWAKILGCLLLLILSISAFICFLDKPDRSQETSAPITATIASPATPYRSSPP
VTNEMSPRTPQPFVDYVRRTIDETPYYKREGRRVNPQNTF
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaagaagaacaaaaacatggcgttgattttgctgagttctgtaataatggta
atttcaattgttgaactcgctgctgcatcatcaccaccgcatgcttcttctggtcctcac
atcgctgatgttaatcttcttttacctcccaaaatgactttccctgttgaatatagactt
caaggaagtgatggatgcttcaaatggtcatgggatcatcatgatattctgtctgttttg
cctgagtataattcaagcaacaagtgctcaactagtgcgaggctgcgatcgatcgcccct
tacagtggtcggaaggagactgctgtttatgctacggatgtgaaaactggaattgtgatc
cgctgcaaggtcttcattgacaacatatccagaatccaaatatttcataattctattaag
cttgatttagacgggcttgctacgttgcacgtccgtgccttcgacagtgaagaaaatgta
ttttcctcattagctggcttacagtttatgtggagccttatgcctgaagccaatggacta
ccctatcggcttgttaatgttcctataaaggattctcccctcagtgattgtgggggactt
tgtggtgacttagacatacaaataaaacttgaagatgatggtgtattttcagatcttttt
gtagtaaagggaattgagattggccatgagatcgtgtcagtgcatttgcttgagccacag
ttacagaatatggctgatgagattcttcttactgttgctgaagctatgtcgcttgaacct
ccctcaccagtttttgtccttgttggcgcagttgttccctacacccttaaagttatccgt
ggaaatattcctcaagtggttactttgccttcaccacatcatcagtggtctgcctcaaat
gattcggttgctcaggttgactcgaagacagggttagcatatgcatggaacttggggatg
acagctatcactgttgaagatacaagggttgctgcccatgtgcaagtttcttcactaaat
gtggtcctgccagcttatttaggtttatatataacacctttgtctagctctggtgatcct
gtggaaggaatcaaatctattcctctaatggcacgttggtatgttgtatctggtcgtcaa
tatcttatccaaataaaggtttttgcacatgcccatgatgaacaagagatttatattaca
gagaatgatgatgtcaatgtttatgattaccggtcggattgctggagaactgtgccggtt
tcaaatgatattgcctttaaacatggctggcggaatactaaactcttgaaagcttattct
caaggacatggaaatttgacagcttctgtgagctatcctgggggggctgatgacaaaaag
gagattatcacggttgcgcaagaagtcatggtctgtgatcaagtaaagttcaccttgggt
aatgaaggtggagtaatcttactgccctgggcccctggtgttcatcaggatgcaaagtta
aaggctgtaggaggttgtgcaaaggccgtgagtgactacaaatggttgtcttcagacata
tctactgtatctgtgtcagcttctggtactatccaggcgaaaaagcctggaaaagctact
attaaagtgatatctgtatatgattcactaaattatgatgaggtcctggttgaagtctcc
attccatcttctatggttatgcttcacaattttcatgtagaaactgttattggatctcgt
cttcaagctgctgtgacaatgaaaacatctaatggtgcctttttctatagatgcgatgcc
ttcaattctttgataaagtggaaagctggaagtgagtcttttgtagttgtcaatgcatct
caggagtcgtcatacttggaaacattgccaaatagtcaggtccatccatcagatgagggc
tttccatgttcttggactcacatatatgcttctaatactggtcaagcaataatccgtgcc
acactttctctagaatatcaccaattcagtcatgctcctgttgtgttaaaagcatcttta
cgcattgcggcatatctaccctttattgtacgtcaggcaggtgacggaaaccactttggt
ggttactggcttgacttggctcaagcagaaaacaacaagcaattgcatagcttggaggag
ttagatcttgtccctgggacaaatttagacttattacttgttggtggacctgaaccatgg
aacaaacatgttgattttattgaatctgtggatgttttgggtggagagaatgatctgtct
gatggagttctcgtgcatcagatatctgacaacagtaggactttgtacagagttttatgt
caaagactgggaacctttaaactgcttttcaaacgtggaaatttggttggggatgatcat
cgtctgccttctgtagctgaagctttgctgccagtgatatgtagcattccttcttctatt
gtacttatagctgatgagccagtgaatgaatatgaaattattagagcatctgctcaagct
gagcgtagttcacggagacttcgcgataaccctattactgtggcaaatgggcgcactatt
cgaatatctgcagctggtattagtgcttctggagaagcgtttgcaaactcatcgtctcta
agtttgaagtgggagctcggcagctgtgagggactagcatattgggattatgcatttaat
attgtgaagtccagcgattgggagaggtttttggtcttgcaaaatgaatcaggattgtgc
attgttcgtgctactgttactggctttctcgatggcttgggagatggtacatttcaccag
ttttctcaaactgaaaatgtgcttacagatgccattcgtttacagcttgtttctatgcta
agagttgatccagagttcagcttgatatatttcaatcctaatgcaaaggtaaatttgtca
attactggggggagctgtttcttggaagctgttacaaatgattctcaagtggtggaagtt
actcaaccaacaacaggattagaatgtcaccaactgagtttgtcccctaaagggttaggg
atagctaatctgactttatatgacatggggctaactcctccattaagagcatctgcactt
gtccaggttgcagatatagaatggattcagatcatgtcaggagaagaaattagcctaatg
gaaggaagtttgcaaactattgacttattggccggtacaaatggaggaaacaattttcat
gcttcccagtttgtttacatgaatcttcatgttcatgttgaggatactataattgagctg
ctggatactgacagtctgtctagtcatgttggtagacatgttaatgcaccaagttttaaa
ataaaggggagatatcttggaattacaaccctttatgttagtgctatgcaacattctgga
catgtagtacaaagtcaagctattagggtggaggtgtacaaagctccaagaatacaccct
catgaaattttcctgctacctggtgcgtcatatgtgcttaccgtggaaggtggcccatct
ctcggtgttcatgttgaatatgcagttgaaaatgataaaattgcaagtattgatagatat
actggacggctcttggcaatttctactgggaacacaacgattatcgctagcgtctttgtg
aatggaaatactgtgatttgtgaagcaaggagtgttttaaaggtgggagtttcatctact
atcaaattgcacatgcagagtgaacaactaggagttggctgcaaactaccaatttatccg
ttatttcctgagggaaatttattttctttctacgagctatgtaaaagttaccagtggact
attgaagatgaacaggtgctgagtttcaaggtggcagagagcttgcatggtgaaaaatat
gggaccgcttcagaagatagtcaagttggcggttattttgatgagaatgacattggcttt
attaacgtcttgtatggaaggtctgcgggcaagacaaaagttgctttgtcattctcgtgc
gagttttcaacttctgggtcgaaaacacagtcaaggttgtacagttcatctttatcagta
acagtagttcccgatcttcccctggctttgggactcccaataacctggattcttcctccc
tactatacaactacaagccttttgccttcctcctcagaatcttattatgatggtcagaat
cacaaaggaaccatcaagtattctttattgagtagtatagataaaaatgctctgcagaat
gatgccgtgttcattgatggggataaaattaaaacatcagaaagtaataatcttgcatgc
attcaagccaaagatcgtaccactggtagaatagagattgcttcctgcgtcaaggtttct
gaggttactcaagttagaatagcaagtaaggaggtgctgttcaaagtgattgaccttgct
gttggtgcagaatttgatcttccaacaaccttttatgatactctaggaaaccctttctat
gaagcatacaatgcagtgcgtgtctatgctgaaactaactaccctgatgttcttgccata
aacaaaactgctgatggaaaagggaatattcacataaaggcaattcggcacgggaaagct
cttgtgcgtgtagcaattagtgaagcccaacaaaagtcagactacgtgctgattagagtt
ggtgcccatgtatatcctcgaaatccagttcttcatattggaagtcctcttaacttgagc
atcagaggattgaatgataaagtttctggacagtgggttacgactaatgaaagtgtaata
tcagtggatgcgttatctggagtggccaaagctattggagaaggttcagcccaagtatat
ttccattatgaaagatcaaagaagctgcaaacaacaattacggtgttgaaaggacacagt
atttctgtggatgctccaaaagggatgttaactaatgttccataccctacaaaaggatac
aacttctccgtgaagttcagtagtaccacctatggtgaaagccttgatgcaccaggagga
aacaagataatatcattcgactgtagagtagatccgccatatgtcgggtacgtcgagcca
tggctggatttggacactggcaactcatattgcgtatttttcccttactcacccgagcat
ttagtgcactcaatacccaagtcagaaggcactagaccagacgtatctgtctccatatat
gcttctctcaaagaacatgaacatgttttgggatctgcatcagctcttttcattggaggt
ttttctataatggaaatgggcaaggatccaatgcagctgagtctgacaccagactcaaac
aaaacttacataaccatagtgggaaataccgatgtcgaaattcactggaatcgccgagat
ttgattatgatcgttcccatcagtaaagacgattttggcgttcgaggttttgcacgttat
gaggtcaaactgctgaaaggcgagagattcaaagacaaaatcatcatcacactcccaact
aatggtcagagaatggaaataggcataacccatgaacctgaaccggatgaaaaagcactc
tccaatgtagccataaataaaaccctctgggcaaagatcttgggttgtctcctgttgttg
atactttcgatctctgccttcatatgtttcctggacaaaccagatagatcgcaggaaaca
agtgctccgatcactgcaactattgcatcacctgcaactccttacagaagcagtccacct
gttacaaatgaaatgtctcctcggacgccacaaccatttgtagactatgtaagaagaacg
atcgatgaaactccgtactacaagagggaaggaagaagagttaatccacagaatacgttt
tag
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