Trifolium pratense (red clover): 123910439
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Entry
123910439 CDS
T08949
Name
(RefSeq) basic helix-loop-helix protein A-like
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tpra03000
]
123910439
Transcription factors [BR:
tpra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
123910439
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Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_IRO3
bHLH_SAC51
ACT_ACR9_3rd
ACT_4
Motif
Other DBs
NCBI-GeneID:
123910439
NCBI-ProteinID:
XP_045817497
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All DBs
Position
LG1:19527242..19539618
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AA seq
661 aa
AA seq
DB search
MNNMASHEPPIGSSKLQNMLQAAVQSVQWTYSLFWQLCPQQMILVWGDGYYNGAIKTRKT
VQPMEVNAEEASLQRSQQLRELYESLSAGETNPPTRRPCASLSPEDLTESEWFYLMCVSF
SFPPGVGLPGKAYTRRQHVWLTGANEVDSKTFSRAILAKSANIQTVVCIPVLDGVVEFGT
VEKIQEDLNFIKHVKSFFVDNHSMPPKPALSEHSTSNPTSSTDHIPIIMYTVADPPMTNP
NQDDMDEDEEEEEEDDEEEGEVESGSDNEIGGRNRRATSMTPIVEPSELMQIEMPDDIRV
GSPNDGSNNLDSDFHLLAVSNQGNPSGQVDSYKTMSTRRWGPIEDSVQVQPPSSVLHHPL
EDLTQEDTHYSQTVSTILQNQSTRWINSPSINYITYSTQSSFTNWTNHNFHALPPDSNTS
QWLLKYILFTVPFLHTKNHDETSPQTNDTSGGLNNDPSARLRGKGGPQDELSANHVLAER
RRREKLNERFIILRSLVPFVTKMDKASILGDTIEYLKQLRRKIQDLETRNRQIESERSGG
TVLVGPTEKKKVRIVEGCSGANRAKAVEVVEKEVVASVQVSIIESDALLEIECLHREGLL
LDVMQMLRELRIEVIGVQSSLNNGVFVAELRAKVKENEANGKKVSIVEVKRALNQLIPHN
I
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatatggcttctcatgaacctccaataggtagtagtaagcttcaaaatatgttg
caagctgcagtgcaatctgttcaatggacttatagcctcttctggcaactttgtccacaa
caaatgattcttgtatggggtgatggatattacaatggagcaattaagacaaggaagaca
gtgcaaccaatggaggtaaatgcagaggaagcatctctacaaagaagccaacaactaaga
gaactgtatgaatcattatctgccggagaaacaaatccgccaactcgtcggccttgtgct
tccttgtcgccagaggacctaacagaatctgaatggttctacttgatgtgtgtctctttc
tcttttcctcctggtgtcgggttgccgggaaaggcatacacgagaaggcagcatgtgtgg
ctcacgggtgcaaacgaagtggacagcaaaacattttcaagagctattttagccaagagt
gctaatatacagactgtggtatgcattcctgtattagacggcgttgttgagttcggcact
gtagaaaagattcaagaagaccttaatttcatcaaacacgtgaagagcttctttgtagac
aatcattcaatgccgccaaagccagcattatcagaacactcaacctctaacccaacttct
tcaactgatcacattcccatcatcatgtacaccgtggcagacccacccatgacaaatcct
aaccaagatgacatggatgaagacgaggaagaggaagaagaagatgatgaagaagaaggt
gaagttgaatcaggatccgacaatgaaataggaggtcgtaatcgacgtgcaacttcaatg
acaccgattgtggagccaagtgagcttatgcagattgaaatgcctgacgatattcgagtc
ggatcaccaaacgatggttcgaataatttggactcagattttcatttgctagcagtgagt
aaccaaggaaacccatcaggtcaagttgactcttacaaaactatgtcgacacggaggtgg
ggtccaattgaagactcggtacaagttcaaccgccatcttcagtgcttcatcatccatta
gaagacttaacacaagaagacacacactactctcaaacagtatcaaccattctccaaaac
caatcaacaagatggatcaattcaccttctatcaactacattacttactcaacccaatca
tctttcaccaactggaccaatcacaacttccacgcgctgccgccggactccaacacctcg
caatggctcctcaaatacatcctcttcacagtcccattccttcacaccaaaaaccacgac
gaaacctccccccaaaccaatgacacttccggaggactcaacaatgatccctccgctcgg
ctacgcggtaaaggaggaccgcaagacgagctcagcgcgaaccatgttctcgctgagcga
agacggagagagaaactcaatgagaggttcattattttacgatcattggttcccttcgtt
acgaagatggataaagcttctatattaggtgatacgatcgagtacttgaaacagctccgg
agaaagattcaagatctcgagacgcgtaaccgtcagatagaatctgagaggagtggcgga
accgttttggttggtcccactgagaagaaaaaagtgaggattgtggaagggtgtagtggg
gctaatagagcgaaagcggttgaggtagttgagaaggaggttgttgcgtcggttcaagtt
tcgattattgagagtgatgctttgttggagatagaatgtttacacagagaaggtttgctg
ttggatgttatgcagatgttgagggagttgaggattgaggttattggggttcagtcttcg
cttaacaatggtgtttttgtcgcggaattgagggctaaggtgaaggaaaatgaagcaaat
gggaagaaagttagtattgtggaagttaagagagcacttaaccaacttatacctcataac
atttag
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