Trifolium pratense (red clover): 123920291
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Entry
123920291 CDS
T08949
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
tpra
Trifolium pratense (red clover)
Pathway
tpra03420
Nucleotide excision repair
tpra04120
Ubiquitin mediated proteolysis
tpra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123920291
04120 Ubiquitin mediated proteolysis
123920291
09124 Replication and repair
03420 Nucleotide excision repair
123920291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tpra04121
]
123920291
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123920291
Enzymes [BR:
tpra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
123920291
Ubiquitin system [BR:
tpra04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
123920291
Multi subunit type E3
SCF complex
Ring finger protein
123920291
Cul2 complex
123920291
Cul3 complex
123920291
Cul4 complex
123920291
Cul7 complex
123920291
Cul8 complex
123920291
Cul9 complex
123920291
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
123920291
TCR (transcription coupled repair) factors
Cul4-CSA complex
123920291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
123920291
NCBI-ProteinID:
XP_045828511
LinkDB
All DBs
Position
LG4:complement(13681900..13684955)
Genome browser
AA seq
117 aa
AA seq
DB search
MATLDSDVPMVPAGEASSSGAGPSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMD
LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttgattccgacgtgcctatggttcccgccggcgaggcttcaagcagtggc
gccggtccatcttccaagaaacccaagcgattcgagatcaagaagtggaacgctgtcgct
ctctgggcatgggatatcgttgttgataactgtgctatatgccgaaaccacatcatggat
ctctgcatcgagtgccaagctaatcaggctagtgctactagcgaggaatgcactgttgct
tggggggtttgtaaccacgcttttcacttccattgcattagcagatggctcaagactcgg
caagtttgtcctctagataacagtgagtgggagtttcagaaatatggccactag
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