Trifolium pratense (red clover): 123920319
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Entry
123920319 CDS
T08949
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
tpra
Trifolium pratense (red clover)
Brite
KEGG Orthology (KO) [BR:
tpra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpra03400
]
123920319
DNA repair and recombination proteins [BR:
tpra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
123920319
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
ResIII
zf-C2HC_2
zf-C3HC4_4
zf-RING_2
zf-C2H2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
123920319
NCBI-ProteinID:
XP_045828545
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Position
LG4:13912563..13920215
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AA seq
900 aa
AA seq
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MELRSCRRVSDENDSEDRKGKKPMIDDTDGKCDIDTDEDDPAVYLKSDSDYEAEDLGGNF
PFDLNQDPTLSDSDFDGEDYASDFSDGSESLSKRIMAQSRKRGRKSKTEIGGFIDIADLA
RALEENELPTMVFDEAPVVLPMVNRKTKAKKAKKGDKPVLLWHAWQEEHERWIDQNLLED
VNLDQSEVMHETAEASSDLIIPLLRYQREWLSWALKQESSVARGGILADEMGMGKTLQAI
ALVLAKRELQQMSCEPDEQSHSPGSSKVLPVIKGTLVICPVVAVNQWVTEIDRFTLKGST
KVLVYHGPKREKIAEQFSEYDFVISTYALVESEYRKHVMPPKEKCPYCGKLYNPSKLTIH
LKYHCGPNAIKTNKQSKQSKKKKSGQSSKMDGELEHNPIKKKVEEMRLGVEGNEKSFLHA
VKWQRIILDEAHCIKSRHCNTTKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQIVPF
SYNLCKDCDCRILDHSSSKECPNCSHSSVRHFCWWNKNIATPIQTHGYGNSGKRAMILLK
NKILKSIVLRRTKIGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNESQSQFNTYVEAN
TLTNNYAHIFDLLTRLRQAVDHPYLVVYSPTAAALKGENLASNGEQECGLCHDTVEDPVV
TSCQHTFCKGCLIDFSASLGRVSCPSCSTLLTVDLTSNNDAVVNKTTIKGFRSSSILNRI
QIENFQTSTKIEALREEIRFMVERDGSAKAIVFSQFTSFLDLINYSLQKSGVSCVQLNGT
MTMAARDAAIKKFTDDPDCKIFLISLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRI
HRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTIGGSNEALGKLTVADLKFLFAN
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcgttcttgtcgtcgcgtttccgatgaaaacgattccgaggataggaagggg
aagaagccgatgattgatgatactgatgggaagtgtgacattgataccgatgaagacgat
cctgccgtgtatttgaaatctgattctgattatgaagctgaagacttgggtgggaacttc
ccatttgacttgaatcaagacccaactttaagcgatagtgattttgatggagaagattat
gcttctgatttttctgatggtagtgagtctttatctaaaaggataatggcacagtccaga
aagagaggaagaaaatccaagactgaaatcggaggttttattgatatagctgatttagct
agagcgttggaggagaatgagttgcctacgatggtttttgatgaagctccagttgtttta
cctatggtgaataggaagacaaaagcaaagaaggcaaaaaagggagataagccagtgttg
ttatggcatgcttggcaagaagaacatgagagatggattgatcagaatttgttggaagac
gttaacttggatcaaagtgaagtgatgcatgagacggccgaggcatcgtcagatctgatt
attcctttgctgaggtaccaaagggaatggttatcctgggctttgaagcaggaaagttct
gtagctagaggaggaatcctcgctgatgaaatgggcatggggaaaactcttcaagcaatt
gcccttgtccttgctaaacgtgaattacaacaaatgagttgtgaaccagatgaacaatca
cattcgccagggtcatctaaagtccttcctgtgatcaaaggaacacttgtcatttgtcct
gtggttgctgttaatcagtgggttactgagattgatcgatttactttgaaaggaagcacc
aaagttctggtttatcatgggccgaagagagagaagattgccgaacagttctcagagtat
gattttgttatatcaacatatgctcttgttgaatcagagtacagaaagcatgtgatgcct
cctaaggagaagtgtccatattgtggaaaattatataacccgagtaagctaactattcac
ctgaagtaccattgtgggcccaatgctattaaaacaaacaaacaatcaaagcaaagcaag
aaaaagaaaagtggtcagagttcaaagatggatggagagttggaacataatcctattaag
aagaaggtagaggaaatgcgcctcggagtagaaggcaatgagaagtcatttttgcatgct
gtaaagtggcagaggatcatattggatgaggcacactgtataaaatctaggcattgtaac
actacaaaagcagttcttgctttagagtcttcttacaaatgggcattaagtggtacaccc
cttcagaatcgtgttggagagctatattctttggtacgatttctgcagatagttcctttt
tcctataacctgtgcaaggactgtgattgcaggatacttgatcatagctcgtctaaagaa
tgtccaaactgctctcacagttcagttaggcatttttgctggtggaacaaaaatattgcg
actccaattcaaacacacgggtatggcaatagtggcaaaagagctatgatattgctcaaa
aacaaaattttgaagagcatagttttaaggcgaactaaaataggcagggctgctgatctt
gcacttccgcctaggatcgtttcattgaggagggatagtctggatataaaagagcaagac
tattacgaatcactatataatgaaagtcagtcacagtttaatacatatgtcgaagcaaat
actctgacaaataattatgctcatatttttgacctcctcacacgactacgtcaggctgtg
gatcatccatatcttgtggtgtattctccaactgccgcagcactaaaaggtgaaaacttg
gctagcaatggtgaacaagaatgtggcctttgtcacgatactgtggaagatcctgtggtt
acctcttgtcagcatactttttgcaagggatgcttgatagatttctctgcttctttggga
cgtgtatcgtgcccctcatgctctacattactcactgttgatttgacttccaacaatgat
gctgtggttaataaaacaacaatcaagggtttcagatcttcaagcattttaaacagaatt
cagatcgagaattttcagacgagtactaaaatagaggcattgagagaagaaattagattt
atggttgaaagggatggttcagcaaaagcaattgtttttagccagttcacatcattcttg
gatcttataaactactccttgcaaaagtcaggtgtatcttgcgttcaattgaatggaacc
atgacaatggctgctcgggatgctgccattaagaaatttactgatgatccagactgcaaa
atttttctcataagcttgaaagccggaggtgttgctctgaatttgaccgtcgcatctcat
gttttcctcatggatccttggtggaaccctgcagtggagcgtcaggctcaggacagaatt
caccggatagggcaatacaaaccaatcagaattgtgagatttgtcatcgaaaacacaatt
gaggagaggatcttgaaactgcaagagaagaaggaactagtatttgaagggactataggc
ggctctaacgaggctctagggaagttgacggtggccgacttaaaatttctctttgctaac
taa
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