Trichogramma pretiosum: 106659792
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Entry
106659792 CDS
T07644
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
tpre
Trichogramma pretiosum
Pathway
tpre03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tpre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106659792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tpre03041
]
106659792
Spliceosome [BR:
tpre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106659792
Complex C
U5 SnRNP specific factors
106659792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
TniB
Motif
Other DBs
NCBI-GeneID:
106659792
NCBI-ProteinID:
XP_014237975
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MDPDYYDEFGNYIGPELASDSEDENDYGQADDDVDDRDRSDEEMEEDREADKDVAETNTM
AVVLHEDKKYYPSALEVYGAEVETLVQEEDAQPLDKPLIAPTRKAKFQIKAQELPETTYS
IDYLADLMDCPDLIRNVVLLGHLHHGKTTLVDCLIRQTHPHVHSVTDEKPLRYTDTLFTE
QQRGVSTKAVPVTLVLPDVKSKSYLMNIFDTPGHVNFSDEATAAIRLSDGAVLLVDAAEG
VMLNTERLLKHAIQEKLAITVCINKIDRLIIELKLPPLDAYYKLRHIIEEVNALIARFSD
SEDVQFVSPALGNVCFASSEYNVCFTLKSFAALYAKDYPEINIEEFSKRLWGDVYFNSKT
RKFLKKQPHNTAQRSFIEFILEPLYKIFAQVVGDVDSTLADVLEETGIRLTSEEMKMNIR
PLLRLVCTKFLGDMSGLVDMCVTHIPNPKANAMNKISHIYTGPTDSPLAQDMIDCNPEGR
LMIHSTKMYPTDDCTLFVVLGRVMSGTLNAGERVRVLGEAYTRQDEEDSRVLTAGRLWVS
EARYNIELSMVPAGNWVLIEGIDRSIVKTSTITDLTDADDLYIFRPLKFNTQSIIKIAVE
PVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMHDLRRMYSEIDI
KVADPVVSFAETVVETSSLKCFAETPNKKNKLTMIAEPLERGLAEDIEAEQVKITWNKKK
LGEFFQQKYDWDLLAARSIWAFGSDATGPNILVDDTLPSEVDKSLLNSAREAIVQGFQWG
TREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLF
VEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQG
QAFCLSVFHHWQIVPGDPLDKSITIRPLEPQPATHLAREFMLKTRRRKGLSEDVSINKFF
DDPMLLELARQDVMINYPM
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggatccggactactatgacgagtttggcaactacatcgggcccgagctggcttcggac
agcgaggacgagaacgactacggccaggccgacgacgacgtcgacgaccgcgacaggtcc
gacgaggagatggaggaggaccgcgaggccgacaaagacgtggccgagaccaacaccatg
gctgttgtcctacacgaggacaaaaagtactatcccagcgcgctcgaggtctacggtgcc
gaggttgaaaccttggtgcaagaggaggatgctcagcctctggacaagccactcatagcg
ccaacaagaaaagccaagtttcaaatcaaagctcaagaactgcctgaaacaacttacagt
atcgattacttggccgatctcatggattgtccagatttgataaggaacgttgttttatta
ggacatttacatcatggtaaaactaccctggtggattgccttattcgtcaaactcatcct
catgtgcattctgtgactgatgaaaaaccattgaggtacacagatactctattcactgag
cagcagcgtggtgtaagcacaaaagcagtaccagtgactcttgttctacccgatgtaaaa
tcaaagtcttacttgatgaatattttcgatactccgggacatgtcaatttttcagatgaa
gccactgctgccattagattatctgatggagccgtgctgttagtcgatgctgctgaaggt
gtcatgttgaacactgaaagattgctaaaacacgccattcaagaaaagcttgccattaca
gtttgcatcaacaaaattgatagacttatcatagaattgaaattaccacctctagatgca
tattacaaattacgtcacattatagaagaagtcaacgctctgattgcccgcttctcagat
tctgaagatgttcaatttgtgtctccggctcttggcaatgtatgttttgctagctcagaa
tacaatgtgtgctttacattaaaatcatttgcagcattgtatgccaaagattatccagaa
ataaacattgaagaattttcaaaaagactttggggtgacgtgtactttaatagtaaaact
agaaagtttttgaagaaacaaccccacaacacagcgcaaagaagtttcattgaattcatt
ttagaacctttgtacaaaatttttgcccaagtggttggagatgttgattcgacattggct
gatgtgctcgaagagactggaatacgtttgacttcagaggaaatgaagatgaacattcga
cctctgcttagacttgtttgtacaaaatttttaggtgacatgtctgggttagttgacatg
tgtgtaactcacatacctaatccaaaagccaatgcaatgaacaaaatatctcacatttac
actggacctacagactcgcctttggctcaagatatgatcgactgtaatcctgagggtaga
ctaatgattcacagcaccaagatgtatccaaccgacgattgtactctcttcgtagtgtta
ggccgtgtgatgtcgggtactttgaacgcgggtgaacgcgtccgagttctcggagaagcc
tacactcgtcaagacgaggaggactctcgcgtgctcaccgcgggccgtttgtgggtgagc
gaggctcgctacaacatcgagctgagcatggtgccagccggtaattgggtactcatcgag
ggcatcgaccgctcgatcgtgaaaacgagcaccataacggatctcacggacgccgacgac
ctgtacatcttcaggccgttgaagttcaatactcagagcatcatcaagatcgccgtggag
cccgtcaacccgtcggaattgccaaaaatgttggacggactgagaaaggtcaacaagagc
tatcctctgctgggcaccagggtcgaggagagcggagagcacgtggttctgggtaccgga
gagttatacttggattgcgccatgcacgatttgaggagaatgtactcggagatcgacatc
aaagtcgccgatccggtggtgtcgttcgccgagaccgtcgttgagacgagctcgttgaag
tgtttcgccgaaacacccaacaaaaagaacaagttgaccatgattgccgaaccattggag
agagggttggcggaagacatcgaagccgagcaagttaaaatcacatggaacaagaaaaaa
ctgggagagtttttccagcaaaagtacgactgggatctcttggccgcgcgcagcatatgg
gcattcggctcggacgcgaccggaccgaatatcctggtggacgacacgctgccgtccgag
gtcgataaatcactgctgaatagcgcgcgcgaggccatagttcaaggcttccagtggggc
acgcgcgagggacctttgtgcgaggagcccataaggaatgtgaaattcaaaattctcgac
gccgttattgcgcaggagccccttcatcgcggaggtggtcaaataattcccacggcgcgt
cgggtggcctactcggccttcctcatggcgacgccgcgcctcatggagccctacctgttc
gtggaggtgcaggcgcccgccgactgcgtgtcggccgtctacacggtgctggcgaagcgc
cgcggccacgtgacgcaggacgcaccggtgccgggcagccccctctacacgatcaaggcc
ttcataccggccatcgacagcttcggcttcgagacggatctgcgcacgcacacccagggc
caggccttctgcctgtcggtgttccatcactggcagatcgtgccgggcgacccactggac
aagagcatcaccatcaggccgcttgagccccagccggcgactcatctcgcgcgcgagttc
atgctgaagacgcggcggaggaagggcctgtccgaggacgtgtccatcaacaaattcttc
gacgatcccatgttgctggaattggcccggcaagacgtcatgatcaactatccgatgtaa
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