Salipiger profundus: Ga0080559_TMP4938
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Entry
Ga0080559_TMP4938 CDS
T04656
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tpro
Salipiger profundus
Pathway
tpro00300
Lysine biosynthesis
tpro00550
Peptidoglycan biosynthesis
tpro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Ga0080559_TMP4938
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Ga0080559_TMP4938
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tpro01011
]
Ga0080559_TMP4938
Enzymes [BR:
tpro01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Ga0080559_TMP4938
Peptidoglycan biosynthesis and degradation proteins [BR:
tpro01011
]
Precursor biosynthesis
Amino acid ligase
Ga0080559_TMP4938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
APX25734
UniProt:
A0A1U7DC45
LinkDB
All DBs
Position
complement(4594850..4596334)
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AA seq
494 aa
AA seq
DB search
MDEDTKSLSDLGLTARGGREAWISGISVDSRAVMPGHLFAALPGTKVHGAHFIETALAQG
AVAVLTDAEGAQLAGKALAESDVALVIAAEPRQALAYACALFFGAQPATMIAVTGTNGKT
SVASFVRRIWQELGLRAVNLGTTGVEGDWQAPLRHTTPDPITLHKALAEAAEAGVTHAAM
EASSHGLDQRRLDGVQLVAAGFTNFTQDHLDYHADFEEYFSAKAGLFARVLPEEGTAVIN
IDDARGIDMLAIARARGQEVLTVGESEGADLRLLGQRFDATGQELRLSWHGVVEQLRLNL
IGDFQGWNALLAAGLVISCGAEAEDVFRALPRLDTVRGRMQLAATRESGAGVYVDFAHTP
DAISTAIEALRPHVMGRLIAVIGAGGDRDPGKRPLMGRAAAEHADVVIVTDDNPRSEEPG
AIRAQVLEGAPDAIEVGDRAEAILRGVDMLGPGDALLLCGKGHETGQIVGDTVYPFDDVE
QASVAVAALDGRGL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggacaccaaaagcctttcggatcttggcctgacggcgcgcggcggccgagag
gcgtggatctcgggcatatccgtggacagccgggcggtgatgcccggccatctcttcgcg
gcgcttccgggcaccaaggtgcatggcgcgcatttcatcgagaccgcgctcgcgcagggg
gccgtggcggtgctgaccgacgccgagggcgcccagctcgccggcaaggcgctggccgag
agcgacgtcgcactggtgatcgccgccgagccgcggcaggcgctggcctacgcctgcgcg
ctcttcttcggcgcgcagcccgccacgatgatcgcggtcaccggcaccaacggcaagacc
agcgtggcgagcttcgtgcggcggatctggcaggagcttggcctgcgcgcggtaaacctc
ggcaccaccggggtcgagggtgactggcaggcgccgctgcgccacacgacgcccgatccg
atcacgcttcacaaggcgctggccgaggccgccgaggcaggcgtgacccatgccgccatg
gaggcctcgagccacgggctcgaccagcggcggctcgacggggtgcagctggtggctgcg
ggcttcaccaacttcacgcaggaccacctcgactaccacgccgacttcgaggaatatttc
tcggccaaggccgggctcttcgcccgcgtgctgcccgaagagggcaccgcggtcatcaac
atcgacgatgcgcgcggcatcgacatgctggccatcgcccgggcgcgcgggcaggaggtg
ctgacggtgggcgagagcgagggcgccgacctgcggctgctcggccagcgcttcgacgcg
accgggcaggaactccggctcagctggcacggcgtggtcgaacagcttcgcctgaacctc
atcggggatttccagggctggaacgcacttctcgcggcgggtctggtgatctcctgcggc
gccgaggccgaggacgtcttccgcgccctgccgcgcctcgacacggtgcgcggccggatg
cagcttgcggcgacgcgcgaaagcggtgccggggtctacgtcgatttcgcccataccccc
gacgcgatctcgaccgccatcgaggcgctgcgcccgcacgtcatgggccgcctgatcgcg
gtcatcggcgccggtggcgaccgcgacccgggcaagcgcccgctgatgggccgtgccgcc
gccgaacatgccgacgtggtgatcgtcaccgacgacaacccgcgctcggaagagccgggc
gcgatccgtgcgcaggtgctcgaaggcgcccccgacgcgatcgaggtcggcgaccgcgcc
gaggcaatcctgcgcggcgtcgacatgctcggacccggtgacgcgctgctgctctgcggc
aagggccacgagaccggccagatcgtcggcgacacggtctaccccttcgacgacgtggaa
caggcaagcgttgccgtggccgcgctggacgggaggggcctgtga
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