Thalassiosira pseudonana: THAPSDRAFT_23291
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Entry
THAPSDRAFT_23291 CDS
T01078
Name
(RefSeq) predicted protein
KO
K02293
15-cis-phytoene desaturase [EC:
1.3.5.5
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
Brite
Enzymes [BR:
tps01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.5 15-cis-phytoene desaturase
THAPSDRAFT_23291
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
Pyr_redox
Pyr_redox_2
FMO-like
MurD-like_N
MCRA
HI0933_like
FAD_binding_2
Thi4
FAD_binding_3
FAD_oxidored
Motif
Other DBs
NCBI-GeneID:
7446334
NCBI-ProteinID:
XP_002291632
JGI:
23291
UniProt:
B8C4K2
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Position
6:complement(1793765..1795935)
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AA seq
621 aa
AA seq
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MIITNFILSTVLATSMAFQPHTPILSKPSFSNRVHRSPKIGSSNLVMKDFPKPNVEDTDN
YRYAEAMSTSFKTSLRVTNDSQKKKVAIIGGGLSGLSCAKYLSDAGHEPTVYEARDVLGG
KVSAWQDEDGDWIETGLHIFFGAYPNVMNMFAELGIHDRLQWKIHQMIFAMQELPGEFTT
FDFIPGIPAPFNFGLAILMNQKMLTLGEKIQTAPPLLPMLIEGQSFIDAQDELSVTQFMR
KYGMPERINEEVFIAMAKALDFIDPDKLSMTVVLTAMNRFLNESNGLQMAFLDGNQPDRW
CTPTKEYVEARGGKVKLNSPIKEIVTNDDGTINHLLLRSGEKIVADEYVSAMPVDIVKRM
LPTTWQTMPYFRQLDELEGIPVINLHMWFDRKLKAVDHLCFSRSPLLSVYADMSVTCKEY
EDPNKSMLELVFAPCSPIAGGNVNWIGKSDEEIIDATMGELARLFPTEIANDDKWPATKM
QGPNGQAKLEKYAVVKVPRSVYAAIPGRNKYRPSQTSPIPHFTMAGCYTSQKFLGSMEGA
TLAGKLAAEVIANRALGNADKPVKEIQQHIIDSASKHVVKEPVGVKGEGAIAFGGGYTVG
KKEEDLLRESDPAQYELAVAK
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgatcattacaaatttcatcctctccaccgtcctagcgacatcaatggcctttcaacca
cacacacccatcctctccaaaccatccttctccaaccgtgtccatcgctcccccaaaatc
ggctcttccaacctcgttatgaaggactttccgaaaccaaatgtcgaagatacagacaac
tatcgctacgcagaggccatgtccactagcttcaagacgtctctccgagtgacgaatgat
tcacagaagaagaaggtggctatcattggaggaggattatcaggtctgtcttgtgccaag
tacctctccgatgccgggcatgaacccaccgtatacgaagcacgtgatgtactcggagga
aaggtgtcagcgtggcaagatgaagatggagactggatcgaaacaggtcttcacatcttc
ttcggagcataccccaacgttatgaacatgttcgctgagcttggcatccacgataggctt
cagtggaagattcaccaaatgattttcgcaatgcaggaacttcccggagagttcactacc
tttgatttcatccctggtattccagctccgttcaactttggattggccattcttatgaat
caaaagatgttgacgttgggtgaaaaaattcagaccgctcctcctcttcttcctatgctt
attgagggacagtcattcattgatgctcaggatgagttgagtgtgacgcagttcatgagg
aagtacggtatgcctgagagaatcaacgaggaggtgtttattgcgatggccaaggcgttg
gactttattgatcctgataagttgagtatgactgtggtgcttacggctatgaacaggttc
ttgaatgagagtaatggacttcagatggcattcttggatggaaatcagcctgataggtgg
tgcactcccacgaaggagtatgtggaagcacgcggaggaaaggtcaaattgaactctccc
attaaggagattgtgaccaacgacgatggaactatcaatcaccttctccttcgatctggc
gagaagattgtggccgatgaatacgtctctgccatgcccgtggacatcgtcaaacgtatg
cttcccacaacgtggcagactatgccctacttccgtcagcttgacgaacttgagggcatc
cctgttatcaacttgcacatgtggttcgatcgtaagttgaaagcagtcgaccatctttgc
ttcagtcgctccccactcctttccgtctacgccgacatgtccgtcacatgcaaggagtac
gaagatcccaacaagtccatgttggaattggtctttgctccctgctctcctattgccgga
ggaaatgtcaactggattggaaagtcagatgaggaaatcattgatgctaccatgggtgag
cttgctcgccttttccctaccgagattgcgaatgatgataagtggcctgctacgaagatg
cagggacctaatggacaggcaaagcttgagaagtatgctgttgtgaaggtgccaaggagt
gtgtatgctgccattcctggacgtaacaaataccgccccagtcagacctcccccatccca
cacttcaccatggctggatgctatacctcacaaaagttcctcggatccatggagggtgcc
accctcgccgggaagcttgctgccgaggtcattgccaaccgtgccctcggaaatgcggat
aagccagtcaaggagattcagcaacacattatcgactcggctagtaagcatgttgtgaag
gagccagtgggtgtgaagggagagggagcgattgcatttggaggggggtatactgttgga
aagaaggaggaggatttgttgagggagtcggatcctgctcagtatgagttggcagtagcc
aagtaa
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