Thalassiosira pseudonana: THAPSDRAFT_260768
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Entry
THAPSDRAFT_260768 CDS
T01078
Symbol
HMCS1
Name
(RefSeq) hydroxymethylglutaryl-coa synthase
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00280
Valine, leucine and isoleucine degradation
tps00650
Butanoate metabolism
tps00900
Terpenoid backbone biosynthesis
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
Module
tps_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
THAPSDRAFT_260768 (HMCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
THAPSDRAFT_260768 (HMCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
THAPSDRAFT_260768 (HMCS1)
Enzymes [BR:
tps01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
THAPSDRAFT_260768 (HMCS1)
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GFIT
Motif
Pfam:
HMG_CoA_synt_N
HMG_CoA_synt_C
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
7446804
NCBI-ProteinID:
XP_002286567
JGI:
260768
UniProt:
B8BSY2
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All DBs
Position
1:complement(264267..265860)
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AA seq
449 aa
AA seq
DB search
NVGILAMEFYTPRSYITQAALESHSGVAAGRYTLGLGQDAMAVTGDAEDVNSLALTVTHS
LLEKYDIDPNDVGRLEVGTETLVDKSKSTKTVLMDLFPNNTDVEGATVINACYGGTAALM
NAFAWVESSAWDGRYAIVVAVDIATYARGPARPTCGAGAVAVLVGRNAPLAFADPRERTT
HACNVYDFFKPDHSVEYPTVDGALSQVCYYRALEDCYAKFCDRVDRLEGKGFNAEAADYF
VFHAPYNKLVQKSYGRMHLGDVATKSTTGTATIAEEYLTKPIEETYSDKALEGILKSVSK
SSYSQRLSDANSASKIVGNTYTASVFLGLASLVFHAGGRGDLVEGKSVVVFSYGSGALAT
MYRLHASQRVFTVGEMVKNLDLANRLASREEVHPSELDLALETRARMHRGGAPYSPCHDY
LYSNQRHTIQPGTYFLNGIDSKWVRTYSR
NT seq
1346 nt
NT seq
+upstream
nt +downstream
nt
aacgttggcattctagcgatggaattctacactccgcgatcttacattactcaagctgca
ttggaatctcattcgggggtggcagctggtcggtatacactgggattaggccaagatgcc
atggctgttacgggagacgccgaagatgtcaactcgttggcattgacagtcacccattca
ttattggagaagtatgatatcgaccccaacgacgtaggacgacttgaagtaggcaccgaa
acattggtggataaatcaaagtctaccaagactgtcctgatggatctattcccaaacaat
acagatgtagagggagctacggtcatcaatgcctgttacggaggtaccgctgctctaatg
aatgcatttgcatgggtagaatcctctgcgtgggacggacgctacgccattgtggtagcc
gtcgacattgccacgtatgcacgtggtcctgctcggccgacgtgtggtgcaggagcagtg
gctgtattggtcgggcgcaatgcaccccttgcgtttgcggatccgagggagaggacgact
catgcttgtaatgtctatgactttttcaagccggatcattccgtggagtatcctacggtg
gatggagctttgagtcaggtttgttattacagagctttggaggactgctatgcaaagttt
tgcgatagggttgatcgattggagggcaaaggattcaatgccgaagcagcagattatttc
gtgtttcatgcaccgtacaataagcttgtgcaaaagagttatgggaggatgcatttgggg
gatgtagcaaccaaatcaactacaggaacagctaccattgcggaagaatacctcaccaaa
cccattgaagagacttacagtgacaaagctctagaaggcatcctcaaatccgtctcaaaa
tcatcctactcccaacgcctatccgatgccaactctgcctctaaaatcgttggcaatacc
tacaccgcaagcgtctttctaggattggcttccttggtattccacgctggagggaggggt
gacttggtggagggcaagagtgtcgtagtgtttagttacgggagtggtgcattggctacc
atgtatcgacttcatgcatctcagagggtattcacagttggagaaatggtcaagaatctg
gatcttgccaatcgtttagcttctagggaggaagttcatccatcggaattggatttggca
ttggagactagagcacgtatgcatagggggggagctccttattctccttgccatgattat
ctgtattctaaccaacgtcatactatccaaccaggaacttacttcctcaatggcattgac
tccaaatgggtcaggacttactctcg
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