Thalassiosira pseudonana: THAPSDRAFT_34900
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Entry
THAPSDRAFT_34900 CDS
T01078
Name
(RefSeq) probable homogentisate 1,2-dioxygenase
KO
K00451
homogentisate 1,2-dioxygenase [EC:
1.13.11.5
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00350
Tyrosine metabolism
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
THAPSDRAFT_34900
Enzymes [BR:
tps01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.5 homogentisate 1,2-dioxygenase
THAPSDRAFT_34900
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Gene cluster
GFIT
Motif
Pfam:
HgmA_N
HgmA_C
Motif
Other DBs
NCBI-GeneID:
7446371
NCBI-ProteinID:
XP_002291671
JGI:
34900
UniProt:
B8C4S8
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Position
6:complement(2005085..2006593)
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AA seq
477 aa
AA seq
DB search
MTNDATPPLSYHHGFGNSFDSSAYPSSLPIGRNNPRIVPCGLYTEQLSGTAFTAPRCENR
RTWLYRVVPGVVGTSCQGGFHSYWTRDMKLDPNPMRWGATPLETSSNNTNDTTVNFLQGI
HTLLGSGDPTSKAGIGIYVYAFNTNMTSNTNDDTTTPTTDQHMYNSDGDFLIVPQHFGLA
IQTELGKMTVIPGEICVIPRGIVFSINILQGEGRTEGEEEGADFARGYILEIFRGHFQLP
ELGPIGSNGLANARDFLHPKAYYEDPATSPSANAACIIVNKFGQQLFARVSPHSPYNVVS
WHGNYLPFKYDLRRFCAVNSVTYDHIDPSIYTVLTAKGGDEEGTALADFVIFPPRIMATD
ENTFRPPWFHRNVMTEFMGLISGEYDAKKRSGSGGFVPGGASLHSIMTPHGPDAESYYAN
AKNPCDAPTKFEGGLAFMFESSAMCKVSRYALECDHRERDYAECWDGLKATFPDLHV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacgacgccacccctccactctcctaccaccacggatttggcaactccttcgat
tcatctgcatatccatcatctctccccatcggtagaaacaaccctcgcatcgttccttgt
ggattgtacacagaacagttgtctggaacagcattcactgctccgcgatgtgagaatcgt
aggacgtggttgtatagagttgttccgggggttgttggtactagttgtcaaggtggattt
cactcttattggacacgtgatatgaagttagatcccaatccaatgagatggggagctact
cctctcgagacatcttccaataatacgaacgatacaacagtcaactttcttcaaggcatt
catactctgttgggcagtggtgatcctacaagcaaagctggtatcggaatctacgtctat
gcattcaataccaacatgacatcgaatacaaacgacgacactactactccaactacagac
caacacatgtacaatagcgatggagactttctgatagtacctcaacatttcgggcttgct
attcagaccgagctgggaaagatgacagtcattcctggtgagatttgtgtcattcctcga
gggatcgtgttcagtataaacattctccaaggcgaaggtcgtacagagggagaagaggag
ggtgcagactttgcacgaggatacattctagaaatctttcgaggacactttcaactgcct
gaactcggacccatcggttccaacggattggcaaatgcacgtgactttctccatccaaaa
gcatactacgaagatccggcaacaagcccatcagccaacgcggcatgcatcattgttaac
aagtttggacagcaactgttcgctcgtgtcagtcctcattctccctacaatgtcgtatca
tggcatggcaactacctaccattcaaatacgaccttcgtcggttttgtgccgtaaactca
gtcacctacgaccatatcgacccctccatttacacagtccttacagccaagggaggagac
gaggaaggcacggcattggcagactttgtcatcttcccacctcgtataatggccacggat
gagaatacatttcgtcctccgtggtttcacaggaatgtcatgacggagtttatggggttg
atttctggagagtatgatgccaagaagagaagtggtagtggaggttttgtacccggagga
gcgagtttgcattccatcatgactcctcatggacctgatgcggagagttactatgccaat
gccaagaatccatgcgatgctcccacaaagtttgagggagggctagctttcatgtttgag
tcgtcggcaatgtgcaaggtgtcgaggtatgctttggaatgtgatcatagagagagggat
tatgcagagtgctgggatgggttgaaggctacgtttccggatttgcatgtttag
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