Thalassiosira pseudonana: THAPSDRAFT_36297
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Entry
THAPSDRAFT_36297 CDS
T01078
Name
(RefSeq) predicted protein
KO
K01379
cathepsin D [EC:
3.4.23.5
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
THAPSDRAFT_36297
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tps01002
]
THAPSDRAFT_36297
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_36297
Enzymes [BR:
tps01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.23 Aspartic endopeptidases
3.4.23.5 cathepsin D
THAPSDRAFT_36297
Peptidases and inhibitors [BR:
tps01002
]
Aspartic peptidases
Family A1: pepsin family
THAPSDRAFT_36297
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
THAPSDRAFT_36297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp
TAXi_N
TAXi_C
Motif
Other DBs
NCBI-GeneID:
7449326
NCBI-ProteinID:
XP_002292244
JGI:
36297
UniProt:
B8C847
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All DBs
Position
9:479220..480567
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AA seq
336 aa
AA seq
DB search
MTSVDVGEGKSENVIIKDYSNAQYYGEVMIGTPPQKFTVVFDTGSSNLWVPKVNCQNCGY
WFIHGGKNKFDNSQSTSYKADGSDFHIQYGSGDVQGYFSVDTVTLADDIVITDQKFAEVS
NAGGLGVGYIMGQFDGILGLGFEGLSLGGAKTVFKNAIDQKVVAQPVFAFSLGDNADGEL
TLGGYDDSKFKGDITWIPLSEPKYWQIDIEDITAGSYSSGTTNGIVDSGTSLITGPSTSI
IKIALSVGAMPNIMGQYTIDCAKVPNLPDLEFKINGQVWKVPGKDLVIESAGTCLFAMMG
MDIPTGPQWILGDVFMRKFYTIFDYENQKVGLAEPN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgtggatgtgggagagggtaagtcggagaatgtgattattaaggattatagt
aatgctcagtattatggtgaggtgatgattggtacgcctccgcagaagttcactgtggta
tttgatacagggagcagcaacttgtgggttccaaaggtcaactgtcaaaactgcggctac
tggttcatccacggaggcaaaaacaaattcgacaattcccaatccacctcttacaaagcc
gacggctccgactttcacatccaatacggctcgggtgatgtccagggttacttctccgta
gacacggtgactctcgctgatgatattgttattacggatcaaaagtttgcagaggtgtct
aatgcgggcggattgggagttggttatattatgggacagtttgatggtattttgggattg
ggatttgagggattgagtttgggtggggctaagactgtgtttaagaatgcaattgatcag
aaggtggtggctcagccggtgtttgcgtttagtttgggagacaatgcggatggagagttg
actttgggtggttatgacgactccaagttcaagggagacattacttggattcctctttct
gagcccaagtactggcaaattgatattgaagatattaccgctggatcgtactcttcggga
acaaccaacggaatcgtcgactctggaaccagtctcatcaccggtccctctacttccatc
atcaagattgctctcagcgtcggagccatgcctaacatcatgggtcagtacaccatcgac
tgtgccaaagtgcccaatttacccgatctcgagttcaagattaacggccaagtgtggaag
gtgcctggaaaagaccttgtaattgagagtgctggcacgtgtctctttgccatgatgggc
atggacattcctacaggccctcagtggattctcggggatgtgtttatgcgcaaattctac
accatctttgattatgagaaccaaaaggttggacttgcggagcccaactga
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