Tunturiibacter psychrotolerans: RBB77_11790
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Entry
RBB77_11790 CDS
T10213
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
tpsc Tunturiibacter psychrotolerans
Pathway
tpsc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBB77_11790 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpsc03400
]
RBB77_11790 (nth)
Enzymes [BR:
tpsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RBB77_11790 (nth)
DNA repair and recombination proteins [BR:
tpsc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBB77_11790 (nth)
Prokaryotic type
RBB77_11790 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
XCB31144
UniProt:
A0AAU7ZKT6
LinkDB
All DBs
Position
complement(2898848..2899618)
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AA seq
256 aa
AA seq
DB search
MAKTTVVRTAAKAKAVVGAKARAIAKSEPVAAKKKIGKTVNPLAPERIAAILDALRKTYP
GVVCALNHKGAWELTVATILSAQCTDVRVNLVTPALFKAFSTPKAMAAASLPELEDLIRT
TGFFRNKAKSIQGAARVVTEEFGGKVPQTMEEILTLPGVARKTGNVVLGSWFNIAVGVVV
DTHVMRLSKRLELTKETAPEKVEKDLMKIIPQDRWIAFSHELIHHGRQICVARKPKCVDC
TLERLCNSGDKTWSSH
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagactaccgttgttcgaactgctgcgaaggctaaggctgtggttggggcgaag
gcgcgggctattgcgaagtctgagcctgtcgcagctaagaagaaaatcggaaagacagtg
aatccgctggcgccggagcggattgcggcgattctggatgcactgcggaagacttatcca
ggagtggtttgcgcgctgaatcacaaaggcgcgtgggagctgacggtggctacgattttg
tcggcgcaatgtaccgatgtgcgggtgaatctggtgactccggcgctgttcaaggcgttt
tctacaccgaaggcgatggctgctgcttccctccccgagctcgaagatctgattcggacg
actggtttttttcgcaataaagcgaagtcgattcagggtgcggctcgagtggtgaccgag
gagtttggggggaaggtgcctcagacgatggaggagatactcacgcttccgggggtggct
cggaagacgggcaacgtggtgctcgggtcatggttcaacattgcggtgggtgttgttgtc
gatacgcatgtcatgcggctgtcgaagcggctggaactgaccaaggagactgctcctgag
aaggtggagaaagatctgatgaagatcattccgcaggatcggtggatcgcgttttcgcat
gagctgattcatcatggccggcagatctgtgtagcgcggaaaccgaaatgtgtggactgt
acgctggagaggctttgcaactccggggataagacgtggagttcccattga
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integrated database retrieval system
