Thalassotalea psychrophila: RGQ13_03010
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Entry
RGQ13_03010 CDS
T10151
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy00300
Lysine biosynthesis
tpsy00550
Peptidoglycan biosynthesis
tpsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RGQ13_03010
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RGQ13_03010
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tpsy01011
]
RGQ13_03010
Enzymes [BR:
tpsy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RGQ13_03010
Peptidoglycan biosynthesis and degradation proteins [BR:
tpsy01011
]
Precursor biosynthesis
Amino acid ligase
RGQ13_03010
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
SRP54
Motif
Other DBs
NCBI-ProteinID:
WNC72965
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Position
700664..702229
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AA seq
521 aa
AA seq
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MINKKEQMMLDFSANHFATFSIAKALAEFDITIDNIETKHLVNDSRFVEPGDIFAAVTGT
LSAGNEYINSAVAKGACLVIAQCQNSSEHGTLNSVTEQGNTATVVNFFEFDKQLSLVSAY
YYDKPFKNMSLIGVTGTNGKTSCCQLLAQLFTKNNHKSAIIGTLGAGTLDSLEKINNTTP
GPTKLQQLLAKFSFNKIENVAMEVSSHALSQNRVDANMVDIAVFTNLSRDHLDYHGDMGT
YADVKKRLFLGSAEQVLVLNVDDQYCQSWLGELPDENRQVMYSVNEANKHLLENNEFLLA
TNIVCHNQGVSFKLTSSWGNCEINSALLGEFNVANLLAAMAVLLVKGIELTDITKCTEHL
VPVTGRMETYGATGKATAVVDYAHTPDGLEKALESAKAHCQGELWLVFGCGGDRDKGKRP
MMGSIAEQYADHIVLTNDNPRSEEPSQIAADIKQGIKAINKVDVIIDRQQAVISALSRAK
ENDMVLCAGKGHEDYLIIGDETIAYHEREVVRQFYQGRAKS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
gtgataaacaaaaaggagcaaatgatgcttgatttttcagctaaccattttgctactttt
tcaattgctaaagcgttagctgaatttgatatcactattgataatatcgaaactaagcat
ctggttaatgactctaggtttgttgaaccaggtgacatttttgcggcagtaacaggtact
ctttctgctggtaacgagtatataaattcagcagtagcaaaaggcgcctgtttagtaatt
gctcaatgtcagaacagtagtgaacacggcactttaaatagtgtaaccgagcagggcaat
acggctacagttgttaacttttttgagtttgataaacaactctccttggttagcgcttac
tactacgataagccgtttaaaaatatgagtttaattggtgttaccggcactaatggtaaa
actagctgttgtcagttgctcgcacaattgttcacaaaaaacaatcataaatcagctatt
attggcaccttaggtgcaggtacattagatagcttagaaaaaataaataataccacccct
gggccaactaaattacagcagttattagcgaaattcagttttaataaaattgaaaatgtt
gcaatggaagtgtcgtcacatgccttaagtcagaaccgtgttgatgccaatatggttgat
attgcagtgttcactaatttaagtcgagatcatcttgattaccacggtgacatgggcact
tatgccgatgtaaaaaaacgattgtttctaggctcagcagagcaggtgttggtattgaat
gttgatgaccaatactgtcagtcatggcttggcgagttaccggatgaaaatcgacaggta
atgtatagcgttaatgaagcaaataagcacttattagaaaataatgagtttttattagct
actaacattgtttgtcataaccaaggcgtcagctttaaattaacgtctagctggggcaac
tgtgaaataaacagtgcgctattaggcgagtttaatgttgccaatttattagcggcaatg
gcggtattgttagtaaaaggtatcgaacttaccgatattactaaatgcaccgagcatctt
gtgccagtaaccgggcgaatggaaacatacggggcaacaggaaaagcgacagctgtagtt
gattatgctcatacgcctgatggtttagaaaaagcattagaatcggctaaagcacattgt
cagggcgaactttggttggtttttggctgtggtggtgacagagataaaggcaaacggcca
atgatgggaagtattgccgagcaatacgcggatcatattgtattgactaatgataaccct
agaagtgaagagccgtcgcaaattgctgctgatattaaacagggcatcaaagccattaac
aaagtagacgttattattgatagacaacaagcggttatttctgcattaagccgtgctaaa
gaaaacgacatggttctatgtgcaggtaaaggccatgaagactatttaattattggcgat
gaaactattgcataccatgaacgggaagttgtacgccaattctaccaaggaagggcaaaa
tcatga
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