Thalassotalea psychrophila: RGQ13_06040
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Entry
RGQ13_06040 CDS
T10151
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy01501
beta-Lactam resistance
tpsy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RGQ13_06040
01503 Cationic antimicrobial peptide (CAMP) resistance
RGQ13_06040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpsy03036
]
RGQ13_06040
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpsy02000
]
RGQ13_06040
01504 Antimicrobial resistance genes [BR:
tpsy01504
]
RGQ13_06040
Chromosome and associated proteins [BR:
tpsy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RGQ13_06040
Transporters [BR:
tpsy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RGQ13_06040
Antimicrobial resistance genes [BR:
tpsy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RGQ13_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
HH_MFP_RND
YknX_C
RND-MFP_C
Beta-barrel_RND
HH_YBHG
BSH_CzcB
Beta-barrel_RND_2
HH_EMRA
CzcB_C
OEP
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
WNC73549
UniProt:
A0ABY9U298
LinkDB
All DBs
Position
complement(1424731..1425951)
Genome browser
AA seq
406 aa
AA seq
DB search
MNTAKLFPCILSLFILSACNEPQVIAPEKVEVIVTQLSQKNIPLYGHYIANTQASLDVEV
RARVEGYLEQQHFLEGSFVIKDQLLYSIDDGPYQAALASAQASHIQAKNALAKANRDVKR
IKPLYEQDASSQLDLDNAFADLDSAQASLKSAEASLQQSELELSYTQIRAPISGVVSASN
ADIGALVGGSGISLLTNVQKVDPLFIEFQMTTLDYLQARRRLKSYYEKYKADIEGTSVEG
LVTITLPDGSEYPHLGQMKFTAPKANQETATFTARAEIINPDRELLPGQYTKARIQLDEL
DNSLLLPEQAVKFEQSGSFVYVVLPQNTIERRFVVLGRNVGGSFLVQSGLSNGEKVVLEG
THKVQHGSHVIAIMAKDIKEAAKKAQESENKSQKKAAEKPAKAKEK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggcaaaactttttccctgcatactttctttatttattttaagtgcttgtaat
gaaccacaagtaatcgctcctgaaaaagttgaagtgatcgttacgcagctaagccaaaaa
aatattcctttgtatggtcactatattgctaatacccaagcttcccttgatgttgaagtt
cgagcccgagtagagggttaccttgaacaacaacattttttagaaggcagtttcgtgatt
aaagatcaactgctctactctattgatgatggtccgtaccaagccgcactggccagtgct
caagccagtcatattcaggcgaaaaatgctttagcaaaagccaatagagatgtaaaaaga
attaagccactttatgagcaagacgcttccagtcagcttgacttagataatgcttttgcc
gatttagacagcgcgcaagccagtttaaaatcagcggaagcatccttgcaacaatcggaa
ttagagctaagctatactcaaattcgtgctcccatatcaggcgttgtcagtgcttcaaat
gccgacattggtgcattagttggcggttcaggcatttcattactcaccaatgtacaaaaa
gtagatccgttgttcatcgaatttcaaatgacaacattagattacttgcaagccagacgc
cggttaaaaagttactatgaaaaatataaagcagatattgagggtacctcagttgaaggt
ttagtaacaattacattacccgatggcagcgaatacccacacttaggacaaatgaaattc
actgcgccaaaagcaaatcaagaaactgcaacatttaccgccagagctgaaattatcaac
cctgacagagaactgctaccgggacaatatacgaaagcacgtatacagcttgatgaactt
gacaatagtttattactgccagagcaggcggtaaagtttgaacaaagtggctcctttgtt
tatgtggtattaccgcaaaacaccatagagcgtcgctttgttgtcttaggtcgcaatgtc
ggcggaagctttctagtacaaagcggcttaagtaatggtgaaaaagtagtgttagaaggg
actcacaaagtgcaacatggtagccatgtaattgccattatggcaaaagacataaaagag
gcggctaaaaaagcccaggaatctgaaaacaaatcccagaaaaaagcggctgaaaagcca
gctaaagccaaagaaaaataa
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