Thalassotalea psychrophila: RGQ13_17325
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Entry
RGQ13_17325 CDS
T10151
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
tpsy Thalassotalea psychrophila
Pathway
tpsy01501
beta-Lactam resistance
tpsy01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
tpsy00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RGQ13_17325
01503 Cationic antimicrobial peptide (CAMP) resistance
RGQ13_17325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tpsy03036
]
RGQ13_17325
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tpsy02000
]
RGQ13_17325
01504 Antimicrobial resistance genes [BR:
tpsy01504
]
RGQ13_17325
Chromosome and associated proteins [BR:
tpsy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RGQ13_17325
Transporters [BR:
tpsy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RGQ13_17325
Antimicrobial resistance genes [BR:
tpsy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RGQ13_17325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Biotin_lipoyl_2
HlyD_D23
HlyD_3
Biotin_lipoyl
CusB_dom_1
OEP
DUF3782
Motif
Other DBs
NCBI-ProteinID:
WNC71861
LinkDB
All DBs
Position
complement(4151003..4152103)
Genome browser
AA seq
366 aa
AA seq
DB search
MRFKVLGASALMMLMITGCGEQQKAAPAAAPAPQVGVQVIKPESLTISERYAGKTAALSK
VSVVPQVSGVITKVHIKEGQEIKRGQIMFEIDSQPFEAEVLRQQSNLKQAEAGLALAEVK
YEMSKSLAGSNAMSKLDAEQIKVNRDVAEAALAAAKASLVQAQLSLHKSKVPAPIDGVVG
ITKFGIGDLVGTAHGAIVDIVANGQIEVYTQIGENEHFKSVAKKLKNQQIIPDTIELELA
DGSMYNHTGTINFIGSEVSAGTVTYRVLFSNPDGLLLGGQNVTLVATAGKAKNFHYIPQM
AVMEDQLGRFIYVVGKDNIVEKRIIKLGKRYGVNWIVEDGLQDGEKVIVSGILKAKVGQA
VTPVEE
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcaaagttttaggtgcttcagcactaatgatgttaatgattacaggttgcggt
gagcaacaaaaagctgctccagctgcagcaccagccccacaggttggcgtacaagtaatt
aaaccagaaagtttaacaatttcagaacgctatgctggtaaaacagctgcactgtcaaaa
gtgtcagttgttccgcaagtttctggtgttatcactaaagttcacatcaaagaaggtcaa
gaaattaaacgtggccaaatcatgtttgaaatcgattcacaaccatttgaagcagaagtt
cttcgtcaacaatcaaacttaaagcaagctgaagctggtctggcattggctgaagttaag
tatgaaatgtcgaaaagcttagctggcagtaatgcgatgagcaagttagatgcagaacaa
atcaaagtaaatcgtgatgtagctgaggccgcacttgctgcagcaaaagcatcactagta
caagcacaattatctcttcataaaagtaaagtaccagcgccaattgatggtgtagttggt
attactaaatttggcattggtgatttggttggcactgcgcatggagcaattgttgatata
gtagctaatggccaaattgaagtgtatacccaaattggtgaaaatgaacattttaaatct
gtagctaaaaaactgaaaaatcagcaaattattcctgatactatagaattagagctggct
gatggttcaatgtacaaccataccggcaccattaactttatcggaagtgaagttagcgca
ggaactgtaacgtatcgtgttttattctctaatccagacggcctattacttggtggtcaa
aatgtaactctagttgcgacagctggcaaagcgaaaaatttccattacattccacaaatg
gcggttatggaagatcaattaggcagatttatctacgtagtaggtaaagataatatcgta
gaaaaacgaattattaaattaggtaagcgctacggtgttaactggattgttgaagatggt
ttgcaagatggtgagaaagttattgtttctggcatcttaaaagcaaaagttggtcaagcc
gtaactccagtagaagaataa
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