Trichoderma reesei QM6a: TRIREDRAFT_121381
Help
Entry
TRIREDRAFT_121381 CDS
T02991
Name
(RefSeq) nucleotide exicision repair protein
KO
K15083
DNA repair protein RAD16
Organism
tre
Trichoderma reesei QM6a
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_121381
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
TRIREDRAFT_121381
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
zf-C3HC4
AAA_34
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
18483139
NCBI-ProteinID:
XP_006964511
JGI:
Trire2_121381
UniProt:
G0RGQ1
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MSSSSSSSRNKSESRTTKERNRLEKHHPELKTMWTDLEKMPVMKAGKIDQPASISRQLKP
FQLEGVAWMKAMEKLEWKGGLLGDEMGLGKTIQAVSLIMSDYPAKQPTLVLVPPVALMQW
QSEIKSYTDGTLKTFVFHGTNQKAKNITVKELKKFDVIMMSYNSLESMYRKQEKGFKRKD
GIYKEKSVIHAITFHRAILDEAHCIKTRTTMTAKACFALKTEYRWCLSGTPLQNRIGELF
SLVRFLNIKPFASYLCKQCTCSTLEWSMDENSRCSDCGHAGMQHVSVFNQELLNPIQKFG
NLGPGREAFKKLRLMTDRIMLRRLKKDHTNSMELPVKEVHVDRQFFGEEENDFANSIMTN
GQRKFDTYVAQGVLLNNYANIFGLIMQMRQVADHPDLILKKNAEGGQNILVCCICDEPAE
DTIKSRCKHDFCRACVSSYIKSTDEPDCPRCHIGLVIDLEQPEIEQDEALVKKSSIVNRI
KMENWTSSSKIELLVHELHKLRSDNATHKSIIFSQFTTMLQLIEWRLRRAGITTVMLDGS
MTPAQRQASIEHFMNNIDVECFLVSLKAGGVALNLTEASRVFIVDPWWNPAAEWQSADRC
HRIGQTRPCIITRLCIEDSVESRMVLIQEKKTSMIHSTVNADDKAMDTLSPEDMQFLFRG
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatcgtcgtcatcatcaaggaacaagagcgagagccgtactacaaaggaacgg
aatcgtctcgagaagcatcacccagaactcaaaaccatgtggacagatttggagaagatg
cccgtgatgaaggctggcaagatagaccagccagcgagcatttccagacagctcaagccg
tttcagctcgagggcgttgcttggatgaaggcaatggagaaattggagtggaagggaggt
cttttgggtgatgaaatgggactcggcaagactatccaggcagtgtctctcatcatgtcc
gattacccagccaaacagcccactctggtcctcgtccctcctgttgctctcatgcaatgg
caatcggagatcaaatcctacacagacggcactctcaagaccttcgtgttccacggcacc
aaccaaaaggcgaaaaacatcactgttaaggaactcaagaaattcgacgtgatcatgatg
tcctacaacagtctcgagtccatgtatcggaagcaggaaaaaggcttcaagcgaaaagac
ggcatctacaaggaaaagagtgtcatccatgccatcactttccatcgcgccatactcgac
gaagcacactgcatcaaaacgagaactacaatgaccgccaaagcctgcttcgcgctgaag
acagaatatcgttggtgcttgagcggtacacctctacagaatcgaatcggagagctcttc
tccctggtgaggtttctcaacatcaagccctttgcgtcttatctttgcaagcaatgcact
tgctcgacgctcgagtggtctatggacgaaaacagtcgctgctccgactgtgggcatgcg
ggcatgcaacatgtatccgtcttcaaccaagagctgctcaaccctattcagaagttcggt
aatttgggacctggcagagaagcattcaagaagttgcgattgatgacagaccgcatcatg
ctacggcgactcaaaaaagaccacaccaactccatggaacttcctgtgaaggaagtgcat
gtcgaccgtcaattctttggagaagaggagaacgactttgccaacagcatcatgaccaat
ggacagcgcaagtttgatacctatgtcgcgcagggcgtcctcctgaacaactatgccaac
atttttggtctcatcatgcaaatgaggcaggtcgccgaccatcctgacctgattctgaag
aagaatgctgaagggggtcaaaacatcctggtttgctgtatctgcgatgagccagcagag
gacaccatcaagagccgttgcaagcacgacttttgcagggcgtgtgtctccagctatatc
aagtcgacagatgagccagactgcccacgatgccacattggcctggtcattgaccttgag
cagccagaaatcgagcaagatgaagccttggtcaagaagtcctctatcgtcaatcgcatc
aagatggagaactggacatcctcgtctaaaatcgaactccttgttcacgaacttcacaag
ctgcgttccgacaatgcaacgcacaagtcaatcatcttctcccagtttactacgatgctg
cagctgattgagtggcgacttcggagagctggaatcaccactgtcatgctcgatggtagc
atgaccccggcccagcgacaggcgtcgatcgagcacttcatgaacaacattgacgtggaa
tgctttctggtatcgctcaaggctggcggtgttgcactcaacctcactgaggcatcccga
gtattcattgtagacccttggtggaacccggcggctgagtggcagtctgctgatcgctgc
catcgcattggacaaacacgaccatgcatcatcacgcgcctttgcatcgaagactctgtc
gaaagccgaatggtgctgattcaggaaaagaagacgagcatgatccattccaccgtcaat
gccgatgacaaggcgatggataccttgagccccgaagacatgcaattccttttccgcggt
tcttag
DBGET
integrated database retrieval system
