Trichoderma reesei QM6a: TRIREDRAFT_53818
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Entry
TRIREDRAFT_53818 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRIREDRAFT_53818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tre03019
]
TRIREDRAFT_53818
Messenger RNA biogenesis [BR:
tre03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TRIREDRAFT_53818
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_23
AAA_15
AAA
DUF3584
AAA_28
AAA_25
SRP54
AAA_22
AAA_16
AAA_14
PduV-EutP
ORC-CDC6-like
nSTAND3
Arf
RsgA_GTPase
NACHT
AAA_13
Motif
Other DBs
NCBI-GeneID:
18485608
NCBI-ProteinID:
XP_006961122
JGI:
Trire2_53818
UniProt:
G0R903
LinkDB
All DBs
Position
Unknown
AA seq
287 aa
AA seq
DB search
MSPKQAPPQIIVKNLSYTFPDFSTGVRNISLDLPPRSRTLLIGANGAGKTTLLRLLAGKR
LAPGDAISICGVDPFKEGLEGVTYLGLEWVLNPIVRNDIGVMELLRSVGGDAYPARRDEL
VHMLDIDTNWRMHAVSDGERRRVQLAMGLLRPWTVLFLDEITVDLDVLSRFQFLAWLKRE
TETRECTIVYATHILDNLAGWPTHLVHMHLGTVKEWDTADNMLRSIDATVGPTGNSRLGE
LVMGWLRDDLKARGPRSQANIAPEGKTYGFGGIKIGGYGDESKQREN
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctaaacaagcccctccccaaatcatcgtcaagaacctctcctacacattcccc
gacttctcgaccggcgtccgcaacatctccctcgacctgcccccccgctcccgcaccctc
ctcatcggggccaacggcgccggcaagacgacgctcctccgcctgctcgccggcaagcgc
ctggcccccggcgacgcaatctccatctgcggcgtcgaccccttcaaggaagggctcgag
ggcgtcacctacctcggcctcgagtgggtgctcaaccccatcgtccgcaacgacattggc
gtcatggagctgctgcgctccgtcggcggcgacgcctatcccgcccgccgcgacgagctc
gtccacatgctcgacatcgacaccaactggcgcatgcacgccgtgtccgacggcgagcgc
cgcagggtccagctggccatgggcctcctgcggccctggaccgtcctcttcctcgacgaa
atcaccgtcgacctcgacgtcctcagccgcttccagttcctcgcctggctcaagcgcgag
accgagacccgcgagtgcaccatcgtctacgccacccacatcctcgacaacctcgccggc
tggcccacccacctcgtccacatgcatctcggcaccgtcaaggagtgggacacggccgac
aacatgctgcgctccattgacgccaccgtcggccccacgggcaacagccgcctcggagag
ctcgtcatgggctggctgagggacgacctcaaggcgagaggccccaggagccaggccaac
attgcccccgagggcaagacgtatggcttcggcggcatcaagattggcggctatggtgat
gagtccaagcaaagggagaattaa
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