Trichoderma reesei QM6a: TRIREDRAFT_77086
Help
Entry
TRIREDRAFT_77086 CDS
T02991
Name
(RefSeq) hypothetical protein
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
tre
Trichoderma reesei QM6a
Pathway
tre03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
TRIREDRAFT_77086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tre03400
]
TRIREDRAFT_77086
Enzymes [BR:
tre01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
TRIREDRAFT_77086
DNA repair and recombination proteins [BR:
tre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
TRIREDRAFT_77086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_N
DNA_ligase_A_M
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
18488707
NCBI-ProteinID:
XP_006964686
JGI:
Trire2_77086
UniProt:
G0RGN3
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MPLPFSLVCDLLDASYARAIDRKPTAKTVAVWCSRHCSRINASDTNLAALLSTLLPEKRT
DRVYCIRANGLEKLIGRSLMLGASRLKELALYKQPGLDLDLADCVERILTVTPNPTLAEG
LQVTVEEIDETLHSVAAKASLVETPGREGLEALYRRLSAKEAKWLTRLILKDFQPLVFDE
YALYRSFDPLLPLILKVREDFTTAINTLQRLKEEMPSPRPGTSYADRKSLSSVKPQLSVK
VGRQQWHKARSMKHCLQMCKGLMSVEAKVDGEYCQIHVDVSKGRRGIQIFSKSGKDSTED
RAGLIGAIMKSLAIGNARCHVKTECILEGELVVYSELVSCRHSQKNKIVHCDRGQAELVQ
RQLINTNHPMAASDLRNAFAKVIRERGEGLVLKADQPYFNFENDAQPFTNRCIKLKKDYI
GRFGEVGDFAVVGAGFDAAKARSYSIDNLKWTHFYVGCLDNREEVKRWNAIPEFTAVNVV
ELNETMLKSFLLYANPNSVPVEENVDTKVKHAAGAQPVAMAMAFTNPPVFDMRCFSFERA
SSTNWWSLRFPSVAKIHFDRDFSDVLSFDELQKIAEGATSARDVEDSQENLAWIARLEQA
DPRGLAVDAATQLTATTMPTPSPRRASHNSSGSQPLIRHLTDGFLERSVGSVDAMPPPPH
KLAASQPSPVTDLSKAGLSDTHKPKRPAFSAALFPPAKKSRMDYGHNESKPFLLGPELES
ESPKRRPLGEIDGNSTCTQQLRTLAPAPAGEDEADSDNDTPPSPCTHRGQRKSDAEDKHL
DQTSQQPKDQCKYAGLECQLTDRLILLPNYFSDLKDVEPLFRAHGLANIIRDAEAWIQND
AVDTCPLANSQTGRNKILFVDTVNKEAETKALLSKLEDVRESISEERREWISVFDWRVLH
HLAIFEDAETTKKYYDGFHDPWRRWYSGLV
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgccgttctccctggtctgcgacttgttagatgcatcctacgcacgagcaata
gatcgcaagccaactgctaaaactgtcgctgtctggtgctctcggcattgcagccgtata
aatgcgtcggacaccaaccttgcggcgttgttgtccaccctgctgcccgaaaagaggacg
gacagggtgtactgtatacgagcaaacggtcttgagaagctcatcggacgcagcttgatg
ctcggcgcctctcgactcaaggaactcgcactttataaacaacccggcctggatttggat
cttgccgattgtgtagagcgtatcttgactgtcactccgaacccaactcttgcagaagga
cttcaagtcactgtcgaagagattgacgagactctgcattccgttgcggccaaggccagt
cttgttgaaacgccaggccgtgaaggcttagaggcattatataggcgactctctgcgaaa
gaagccaagtggctcacgcggctgattctcaaggacttccagcctctcgtcttcgatgaa
tatgcgctctaccgctcttttgatcccctgttaccgttgatcctgaaagttcgtgaagac
tttactaccgctatcaatactctgcagcggctcaaggaagaaatgccctctccgagacct
ggcacgtcatatgctgatcgaaagtctctatcctctgtcaagccacaattgtcggtaaag
gtagggagacagcaatggcacaaggcccgcagcatgaagcattgcctccagatgtgcaag
ggcttgatgagcgtggaagcaaaggtggatggagaatactgccaaatccatgtcgacgtt
agtaagggcagacgcggtattcaaatcttctccaagagcggcaaagacagcaccgaagac
agagccgggctgatcggggccatcatgaagtcgttggcgataggcaacgccagatgtcat
gtcaagacagagtgcatactggaaggtgaactggtagtatatagcgaattggtgagctgc
cggcatagtcaaaagaataagatcgttcactgcgacagaggacaagccgaactcgtacag
cggcaactcatcaacaccaatcaccccatggcagcttcagacttgcgaaatgcatttgcc
aaagttatcagagaaaggggcgaaggcttagttctcaaggcagaccagccctatttcaac
tttgagaatgatgcgcagccattcacaaaccgctgcatcaagctcaaaaaggactacatc
ggccgctttggtgaggttggtgatttcgccgtagtcggggccggattcgatgcggccaag
gcgaggtcatacagtatcgacaatctcaagtggacgcacttctatgttggctgccttgac
aacagggaggaagtcaagcgatggaatgcaattccggagtttactgccgtcaatgtcgtt
gagctcaacgagaccatgctcaagtcattcctactctatgcgaacccgaattcagtgcct
gtggaggagaatgtcgacaccaaggtgaagcacgccgccggagcccagccagtagcgatg
gccatggcattcacaaatccgcccgtgttcgatatgcgatgcttcagctttgaaagagca
tctagcactaactggtggagcttacggtttccgtctgtcgccaagattcacttcgaccgg
gatttctctgatgtgctgtcctttgacgagctacagaagattgccgagggcgccacatct
gcccgcgacgtagaagacagccaggagaaccttgcgtggatcgccaggctggagcaggct
gatccaaggggactggccgttgacgctgctacgcagttgacggcaacgaccatgccaacc
ccgtcgccgagacgagcctctcataactcttcgggttcccagccgctgatcagacatctt
accgacggctttctggaacgatcggtaggctcggtagatgcgatgcctccgcctccccat
aaactggctgcttcacagccatctcccgtcacagatctgtcgaaagccggcctgtctgat
actcacaaaccgaagcggcctgcattttcggcggctctgttccccccagcaaagaaatcc
cgcatggattatgggcataatgagtcgaagccatttttactgggacccgagcttgagtcc
gagtcgccaaaacggcgtcccttgggggaaattgatggtaattctacatgtacgcaacag
ctgcggacgttagcgccagcccctgccggtgaagacgaggctgacagcgataatgatacc
ccgccttcaccctgcacacatcgcgggcagcgcaaaagcgatgctgaagacaagcatcta
gatcagacatcccagcaaccgaaggaccaatgtaagtatgctggccttgaatgccagctg
accgatcgtctcatcttactccccaactacttctcggatctcaaggatgtggagccccta
ttccgggcacatggacttgcgaatatcatcagagacgccgaagcctggatccaaaacgac
gcagtggatacttgcccgctggcaaacagtcaaacgggtcgtaacaagattctgtttgtc
gatacggttaacaaagaggcagaaacgaaggctctactttcgaaactggaagatgtccgc
gaaagcatctcggaagagagacgggaatggataagcgtctttgactggcgagttctgcat
cacctcgccatatttgaggacgcagagactacgaagaaatattacgatggttttcatgat
ccttggcggcgttggtactctgggttggtatga
DBGET
integrated database retrieval system
