Talaromyces rugulosus: TRUGW13939_01077
Help
Entry
TRUGW13939_01077 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
trg
Talaromyces rugulosus
Pathway
trg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRUGW13939_01077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trg03041
]
TRUGW13939_01077
Spliceosome [BR:
trg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
TRUGW13939_01077
Complex C
U5 SnRNP specific factors
TRUGW13939_01077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
55988590
NCBI-ProteinID:
XP_035340174
UniProt:
A0A7H8QKF8
LinkDB
All DBs
Position
I:join(3296094..3296113,3296179..3296321,3296376..3298604,3298677..3299239)
Genome browser
AA seq
984 aa
AA seq
DB search
MDDLYDEFGNYIGDGGLSEEESQHGDAPAAGYFYDESDEGEENEAAGQELMEVDEGPSNA
VVLHEDKQYYPSAQQVYGQDVETLVQEEDAQPLTEPIINPILEKKFAIQEVDLPPVFYSR
EFMADLLKFPDQIRNVAIAGHLHHGKTAFMDMLVMQTHDLNERLEKRTGRKRDEQLRYTD
VHLLERQRGLSIKSGPMSLVLQGTKGKSHLFNILDTPGHVNFVDEVAASFRLADGVALIV
DVVEGVQSNTEQIIKYAVLEDLPLVLIVNKMDRLILELKLPPNDAYFKLKHVIEEVNSII
ENTIPGRGEARRVSPEKGNVAFASSSMNWCFTLQSFAQMYAERYSKLDTADFARRLWGDI
FYNPRSRKFTRKGVEEGAKRTFVNFVLEPIYKLYSHTISESPEDLKETLASLNISLKPSQ
LKADAKVLLSLVCEQFFGPATGFVDMVVQHVPSPVEGASKKLERYYTGPLDANIAKSMST
CDQEGPLVIHVTKLYNSVDASTFNAFGRVMSGIARPNQQVRVLGEGYSLDDEEDMVIATI
SETWIAESRYNISTDGVPAGNWVLLSGVDNSIMKTATLVPLKLEEDEDAFIFKPIRHMTE
SVFKVAVEPINPSELPKMLEGLRKINKSYPLISTKVEESGEHVILGTGELYMDCVLHDLR
RLYAEMELKVSDPVTRFCETVVETSAIMCYSITPNKKNKVTMIAEPLDDGITEDIESGRV
SIKDPIRKVAKFFEENYDWDKLAARSIWAFGPDETGPNILQDDTLPSQVDKKLLGTVRDS
IVQGFSWGTREGPLCEEPIRNVKFKVTDVSLADQAIYRGGGQIIPTTRRAVYSSFLMASP
RLMEPIYSCEMLGPADAVASVYTVLSRRRGHVLSDGPVAGTPLYSVRGLIPVIDSFGFET
DLRIHTQGQATVSLVFDKWSVVPGDPLDRDVKLKSLEMANAQATARDFVLKTRRRKGLAE
DVTVSKFLEPELWKGLKESGVLEG
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctttacgacgagtttggcaattatattggcgacggtggattgtccgaggag
gaatcgcaacatggagatgcgccggccgcgggctacttttacgatgaatccgacgaaggc
gaggagaatgaggctgctggccaggagttgatggaggttgacgaaggaccgtcgaatgcg
gtggtgctccacgaggacaaacaatactatccaagtgcccagcaggtgtacgggcaagat
gtcgagaccctggtgcaggaagaagatgctcagcctctcacagagccaatcatcaaccca
atcctggaaaagaaatttgcgatccaggaagtagaccttccacccgtcttctactcgcga
gagtttatggccgatttgctcaagttcccggatcaaatacggaatgtcgcaatcgccggt
catcttcaccacggaaagactgcgttcatggacatgttggtcatgcagacccatgacttg
aacgagcggctggaaaagcgcacgggcagaaaacgcgacgaacagctgcggtacaccgat
gtgcatcttttggagaggcaacgagggctgtcgataaagtctggtccaatgagtcttgtt
ttgcagggaacaaaagggaaatcccatctgttcaacatcctggacacgccaggccatgtc
aactttgtcgacgaggttgctgcgtcttttcgtctagccgatggtgtcgctctcatcgtt
gatgttgtcgagggagtccagtcaaacacagagcagataatcaaatatgccgtgctggag
gatttgccgttggtgctaatcgtcaataaaatggacaggttaatcctggaactcaaactg
ccgccgaatgacgcttatttcaaactgaaacatgtcattgaagaagtcaactcaatcatc
gagaataccatcccaggaaggggagaagcccgacgagtgagcccagaaaaggggaacgtt
gctttcgcgagcagttcaatgaactggtgtttcaccctgcagtcatttgctcaaatgtat
gctgagcggtattcaaaactcgacacggcagactttgcgcgacgattatggggcgacatc
ttctacaaccctcgaagcaggaaattcacgcgaaagggcgttgaagaaggggctaagcga
acctttgtgaactttgtcctggagccgatatataaactttattcacacactatcagcgag
agcccagaagacttgaaagagacgttggcaagtctgaacatatcattgaaaccctcgcaa
ctcaaggccgatgccaaagtgctgctcagccttgtatgcgagcagttcttcggccctgca
actgggtttgtcgacatggtagtccagcatgtaccatctcccgtggaaggagcctcgaag
aagctggagcgatactacactggtccattggatgccaacatcgccaaatccatgtccacc
tgtgaccaggagggtcctttggtcatccatgtcacgaagctatacaacagcgttgatgcg
tcaacattcaatgcctttggtcgagtaatgagtggtattgcccggccaaaccagcaagtc
cgagtgcttggagaaggctattctctcgacgacgaggaagatatggtaatcgccaccatc
tccgaaacgtggattgccgagtctagatataacatttcaaccgacggagtacccgccggc
aactgggtgcttcttagcggcgtggacaactccatcatgaaaaccgcgacgcttgtccca
ctcaaactggaagaggacgaggacgcgtttattttcaaaccaatccggcacatgaccgag
tcggtcttcaaagttgcagtagagcccatcaacccctccgaacttcccaagatgctggag
gggcttcgcaagattaacaagagctaccccctgatctctaccaaggtggaagagtctggg
gagcatgttattcttggcactggcgagctctacatggactgtgtgctgcatgacctgcgc
cggctgtatgccgagatggaactgaaagtttcagacccagtcaccaggttctgcgagacc
gtggtggagacctcggccatcatgtgctactccatcacacccaacaagaaaaacaaagtc
accatgatcgccgagccgctcgacgacggaatcacagaagacattgaaagcggccgcgtg
agcatcaaggatccgatccgcaaagtcgccaagttctttgaagaaaactacgattgggac
aagttggcagcgaggagcatttgggccttcgggcctgatgagaccggaccaaatattctg
caggacgacacgctgccttcgcaagtggacaagaagctacttggcacggtgcgtgattct
attgttcaagggtttagctggggcacgagggaagggcctttgtgtgaagaacccattcga
aatgtcaagttcaaagtcacggatgtttcgcttgccgaccaggctatctaccgcggtggc
ggacaaatcatcccaactacccgtcgtgcagtgtactcgtcattcctcatggcatctcct
cgcctgatggagccgatatattcatgcgaaatgctcggcccagctgacgccgtagcgtca
gtgtacaccgtcctctcgcgccgtcgaggccatgtactctctgacggaccagtcgcgggc
acgccgctgtactctgttcgcggtctgatccccgtaatcgactcgttcggtttcgaaaca
gatctccgaatccatacccagggtcaggccactgtcagcttggtctttgacaaatggagc
gtggtgccaggtgacccgctcgaccgcgatgtcaagctcaagtcgctggaaatggcgaat
gcgcaggctacggctcgagactttgtgctcaagactcgaaggcggaagggattggccgag
gatgtgacggtcagtaaattcctggagccggaattatggaaaggtctcaaagaaagcgga
gtcctcgagggataa
DBGET
integrated database retrieval system
