Talaromyces rugulosus: TRUGW13939_07977
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Entry
TRUGW13939_07977 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
trg
Talaromyces rugulosus
Pathway
trg03420
Nucleotide excision repair
trg04111
Cell cycle - yeast
trg04120
Ubiquitin mediated proteolysis
trg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
TRUGW13939_07977
04120 Ubiquitin mediated proteolysis
TRUGW13939_07977
09124 Replication and repair
03420 Nucleotide excision repair
TRUGW13939_07977
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
TRUGW13939_07977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trg04121
]
TRUGW13939_07977
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_07977
Enzymes [BR:
trg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
TRUGW13939_07977
Ubiquitin system [BR:
trg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
TRUGW13939_07977
Multi subunit type E3
SCF complex
Ring finger protein
TRUGW13939_07977
Cul2 complex
TRUGW13939_07977
Cul3 complex
TRUGW13939_07977
Cul4 complex
TRUGW13939_07977
Cul7 complex
TRUGW13939_07977
Cul8 complex
TRUGW13939_07977
Cul9 complex
TRUGW13939_07977
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
TRUGW13939_07977
TCR (transcription coupled repair) factors
Cul4-CSA complex
TRUGW13939_07977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
PHD_NSD
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
55995466
NCBI-ProteinID:
XP_035347006
UniProt:
A0A7H8R573
LinkDB
All DBs
Position
IV:join(3628378..3628491,3628560..3628638,3628692..3628762,3628825..3628923)
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AA seq
120 aa
AA seq
DB search
MADVEMQDASSAKDKVAKTSKSGAGEASEGKKRFEVKKWNAVALWAWDIVVDNCAICRNH
IMDLCIECQANQGSSTTEECTVAWGICNHAFHFHCISRWLKTRQVCPLDNRDWEFQKYGR
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgttgagatgcaagacgctagttccgcgaaggacaaggtagccaagacctcc
aagtctggagccggcgaggcctcggaagggaagaagcgcttcgaagttaagaaatggaac
gccgttgcgttatgggcctgggacattgtggttgacaactgcgccatttgccggaatcac
attatggatctatgtatcgaatgccaggccaaccagggctcgtcgaccacggaggagtgc
actgtggcatggggaatttgtaaccatgcgtttcactttcactgcatttcgagatggcta
aagactcgacaagtctgtccgttggataacagggactgggagttccaaaaatacggacgg
taa
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