Talaromyces rugulosus: TRUGW13939_08762
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Entry
TRUGW13939_08762 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
trg
Talaromyces rugulosus
Pathway
trg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRUGW13939_08762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_08762
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TRUGW13939_08762
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_23
AAA_15
AAA
AAA_25
AAA_16
AAA_28
DUF3584
AAA_22
AAA_14
PduV-EutP
Arf
RsgA_GTPase
ORC-CDC6-like
NACHT
AAA_13
Motif
Other DBs
NCBI-GeneID:
55996250
NCBI-ProteinID:
XP_035347784
UniProt:
A0A7H8R5G8
LinkDB
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Position
V:complement(574165..574944)
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AA seq
259 aa
AA seq
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MPAPPRIIVNNLTYIFPEYPTGVRNITLDLPPGSRTLLIGANGAGKTTLLRLLAGKRLCP
PKAISIGGVNPFNETLEGVTYLGLEWVVNPIVRNDVGVLELLRSVGGDAYPERRDELVSL
LDIDTRWRMHAVSDGERRRVQLAMGLLRPWTVLFLDEITVDLDVLSRAEFLGWLKRETEQ
RECTIVYATHILDNLAGWPTHLVHMSLGAVKEWGEADKMLQAIDGTVGRTGNSRLGELVL
DWLKEDLKVRGPRSNLLLN
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgccagccccaccccgcatcatagtcaataacctcacgtacattttccccgagtatccc
actggggtccgcaacatcacgctcgacctccctccaggatcacgaaccctcctcatcgga
gccaatggcgccggcaaaactacccttctccggcttcttgccggcaagcgtctctgtcca
cccaaggccatcagcattggtggtgtcaacccgtttaatgagactctcgaaggcgtaacc
tacctcggtcttgaatgggtcgtcaaccccattgtccgcaatgacgttggcgttctggaa
ctactccgctccgtaggaggagatgcctaccccgagagaagggatgaacttgtctctttg
ctggacattgatacccgttggcgcatgcatgctgtctctgacggtgagcgtcgccgtgtg
cagctcgcaatggggttgttgagaccttggacggtgctgttccttgatgaaatcactgtg
gacttggatgttcttagtcgcgccgagtttctgggctggttgaagcgtgagactgaacag
agggagtgtacgatcgtatatgcgacgcacattctggacaacttggctgggtggccgacg
catctggtacacatgagcctgggtgcagtcaaggagtggggtgaggcggataagatgttg
caggccattgatggtacggtgggacgaacgggaaatagtcgcttgggcgagttggtcctg
gattggttaaaggaagacctgaaagtgagaggacctcgaagtaacctcctccttaattaa
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