Talaromyces rugulosus: TRUGW13939_09863
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Entry
TRUGW13939_09863 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
trg
Talaromyces rugulosus
Pathway
trg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRUGW13939_09863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_09863
03041 Spliceosome [BR:
trg03041
]
TRUGW13939_09863
03032 DNA replication proteins [BR:
trg03032
]
TRUGW13939_09863
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
TRUGW13939_09863
Spliceosome [BR:
trg03041
]
Complex A
U1 snRNP components
Sm proteins
TRUGW13939_09863
U2 snRNP components
TRUGW13939_09863
Complex B
U1 snRNP components
TRUGW13939_09863
U4/U6.U5 tri-snRNP components
TRUGW13939_09863
Complex C
U2 snRNP components
TRUGW13939_09863
DNA replication proteins [BR:
trg03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
TRUGW13939_09863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
55997346
NCBI-ProteinID:
XP_035348876
UniProt:
A0A7H8R8I1
LinkDB
All DBs
Position
V:join(3927172..3927198,3927270..3927278,3927337..3927408,3927468..3927897,3927959..3928006,3928057..3928139)
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AA seq
222 aa
AA seq
DB search
MAANKQGKMQNLINYRMRVTLNDGRQMTGQMMAFDKHMNLVLADTEEFRRVKRKATKQAP
GASTAPLVEAEEKRTLGLTIVRGTNVVSCSVDGPPPADPSARLGTSLPGVPSGAATLSAG
PGISRPAGRGLPVGLGGPAAGVGGPAPAGFGGFPPAPPGGFPGGPPPGFGGRGGPLGGPA
GFAPPGFPQGGPGGPPGDFQPPPGFQPPGQGRGYPPPGFGGR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaacaagcagggtaaaatgcaaaacctgatcaactatcgcatgcgtgtgacg
ttgaacgatggtcgacagatgaccggccagatgatggcattcgacaagcatatgaacctt
gttctcgccgatacagaagagtttcgccgtgtgaagcggaaagccaccaaacaggccccc
ggtgcctccaccgcccctcttgtcgaagccgaggaaaagcgaactcttgggttgactatc
gttcgtggcacaaatgttgtctcgtgctcggtagatggaccacctcctgcagacccttca
gcacgtctggggactagtctgcctggcgttccgtccggcgctgctacactttcagccggt
cctggtatcagtaggcccgccggacgaggcctgcctgttggacttggcggcccggctgct
ggtgttgggggccctgctcccgctggctttggaggcttcccacctgcacctcctggagga
ttccctggaggcccgccgcctggttttggtggacgtggaggaccccttggaggacctgct
ggatttgcgccccccggattccctcaaggtggccctggtggacctcctggagatttccaa
ccgcctcccggattccaacctcccggtcaaggccgtggatacccaccccctggcttcggt
ggacgatga
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