Trichomycterus rosablanca: 134301496
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Entry
134301496 CDS
T09921
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
134301496 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
trn01007
]
134301496 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
trn03016
]
134301496 (iars1)
Enzymes [BR:
trn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
134301496 (iars1)
Amino acid related enzymes [BR:
trn01007
]
Aminoacyl-tRNA synthetase
Class I (U)
134301496 (iars1)
Transfer RNA biogenesis [BR:
trn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
134301496 (iars1)
Prokaryotic type
Other AARSs
134301496 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
CNOT1_CAF1_bind
Motif
Other DBs
NCBI-GeneID:
134301496
NCBI-ProteinID:
XP_062842272
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All DBs
Position
24:complement(1642922..1691166)
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AA seq
1263 aa
AA seq
DB search
MVEPVPESISFPSEEERILKFWNEKDCFQECLKQSKNRPRYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQC
RAIVMRYATEWEVSVRRMGRWIDFKNDYKTLYPWFMETVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVMVNFPLLEDESVALIAWTTTPWTLPSNLALCVNP
EFTYVKVKDNATAKVYIMMEARLGALFKSEAEYTILEKFPGKTLKGKQYKPLFQYFIKCK
EDGAFSVVLDNYVREEEGTGVVHQAPYFGADDYRVCMEYEIIQRDSAPICPVDSSGCFTP
EVTHFAGQYVKDADKNIIKWLKENGRLVNTSTFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLENNGKCYWVPEFVREKRFGNWLRDARDWAVSRNRYWGTPIPLWVSDDFEEVVC
VGSIAELEELTGVKVTDLHRETIDGLTIPSRRGKGHLKRISEVFDCWFESGSMPYAQVHY
PFENKREFEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLIVQNYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEDDIQFLYNESTAKLSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PKLVKFVDMLTNWYVRTNRRRLKGESGSEDCMAALETLFSVLFSMCRLMAPFTPFITELM
YQNLRHLIDPASVEEKDSSSIHYLMLPQVRESLIDKRIENAVSHMQSVIELGRVIRDRKT
LPVKYPLREVVVIHQDQEALQDIQSLQKYILEELNVRQLTLSTDKDKYGIRLRAEPDHMV
LGKRLKGVFKAITAAIKELKSEELEAFQKSGTIVVDGHELREEDLRLMYTFDQTSDMATQ
YEAHSDGQVLVLLDITPDQSMVDEGVAREVINRIQKLRKKGHLVPSDEITVYYSSEPAGD
YLHKVVQAHTDFILATTKAPLKPYPVPQNASVIVQEKTQLKGSDLDLTIVKGAWASRAPL
DGPSCAYVNLRVKQQEGVVLLENPKGDNTLTVEKLKMVCRSIFKLDASALTVFNGAAELK
SGADLLALSGKTLCVTSGARPPESTGSDSLLCPYINLQLINTPPAECQTGDVGMLLLANP
AGQNGLQHAALIAEAAKVFGLRGRRLKLYTDQDLTEELLTETSVKNLNTKTLYVKVLPTT
AEA
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaccagtaccagagtcgatcagttttccttctgaggaggaacgcatcctcaaa
ttctggaacgagaaggactgcttccaggaatgccttaaacaatccaaaaacaggcccagg
tacacgttctacgatgggccgccttttgccaccggtctcccccattatggccacattctg
gcgggcaccataaaggacatcgtgacccggttcgcccatcagagcggcttccatgtggac
cgacgcttcggctgggattgccacggcctgcctgtggaatacgagattgataagactctg
gggattaaaggaccggaggatgttgctaagatggggattgccgagtacaacaagcagtgc
agggctatcgtgatgagatacgccaccgagtgggaggtgtcggtgaggagaatggggcgc
tggatcgattttaagaacgactacaagactctgtacccctggttcatggagaccgtgtgg
tgggtgtttaagcagctgtatgataaaggtttggtgtacagaggggtgaaggtcatgccg
ttctctacagcctgtaacacgccgctgtccaacttcgagtcgcaccagaactacaaggac
gttcaggatccgtccgtcatggtgaacttccctctgctggaggacgagagcgtggctctg
atcgcttggaccaccacgccgtggacgctacccagtaacctggcgctgtgcgtcaacccg
gagttcacctacgtcaaggtcaaagacaacgccacggccaaagtgtacatcatgatggag
gccagactgggggcgctgttcaaatctgaggctgagtacaccatcctggaaaagtttcct
ggtaaaactctgaagggtaaacagtacaaacctctgttccaatatttcatcaagtgtaag
gaggacggagcgttttcggtcgtgctggataactacgtcagagaggaggagggtaccgga
gtggttcaccaggcgccctacttcggagccgacgattaccgggtgtgtatggagtacgag
atcatacagagagactcggcgcccatctgccccgtcgactcgtccggctgcttcaccccc
gaggtcacgcacttcgccggccagtacgtcaaggacgccgacaaaaacatcattaagtgg
ctgaaagagaacgggcggctggtcaacaccagcactttcaagcacagttaccctttctgc
tggaggtcggacactccgctgatctacaaagccgtgccgagctggttcgtgagggtggaa
cacatggtggagaaacttctggaaaacaacggcaaatgctactgggttcctgaatttgtg
agggagaagcgtttcggcaactggctgagagacgcccgggactgggccgtgtctcgtaac
cgatactgggggactcccattcctctgtgggtcagcgacgacttcgaggaggtggtgtgt
gtgggctccatagccgaactggaggagctgaccggagtgaaggtcactgatctgcaccgg
gaaaccatcgacggcttgaccatcccgtcgcggcgtgggaaaggtcacctgaagaggatc
tctgaggtgtttgactgctggttcgagagcggcagcatgccctacgctcaggtgcattac
cccttcgagaacaagcgggagtttgaggacgcctttcctgcagacttcatcgcagagggc
atcgaccagaccagaggatggttctacacgttgctggtgctctcgactgctctgtttggt
aaaccgccgttcaagaacgtcatcgtcaacggcctggttctggccagcgatgggcagaag
atgagtaagaggaagaagaactacccagacccgggcttgatcgtacagaactacggagct
gatgcgctcaggctgtacctgatcaactctcccgtggtgcgagctgagaacctgcgcttc
aaagaggagggggtgagggacgtgctgaaggacgtcttcctgccctggtacaacgcttac
cgcttcctcgtacagaacgtccagagactccagaaggaggatgatattcagttcctgtac
aacgagagcacggccaagctgagcgacaacatcatggataaatggatccagtccttcacg
cagtcgctcattcagttcttcaaggccgagatggacgcttacaggttgtacacggtcgtt
cccaaactggtgaagttcgtggacatgctgaccaactggtacgtgaggacgaaccgcagg
cgtctgaagggcgagagcggaagtgaggactgcatggcggctttggagactctgttcagt
gtgctgttctccatgtgcagactgatggctcccttcactccgttcatcaccgagctgatg
taccagaacctgcggcacctgatcgaccccgcctcggtggaggagaaggattccagcagt
atccactacctcatgctgcctcaagtcagggagtcgctgatcgacaagcgtatcgagaac
gccgtgtcccacatgcagtcggtcatcgagctgggccgagtgatccgcgaccggaaaacg
ctgcccgttaagtatcccctcagggaggtggtggtcatccatcaggaccaagaggctctt
caggacattcagtccctgcagaaatacatcctggaggagctgaacgtgcgccagctcacc
ctgtccaccgacaaagataagtacggcatccgcctgagggcggagcccgaccacatggtc
ctggggaagaggctgaagggtgtgttcaaggccatcacggcggccatcaaggagctgaag
agcgaggagctggaggccttccagaaatcaggtaccatcgtggtggacggacacgagctg
cgtgaggaggatttgcgtctgatgtacaccttcgaccagacgtcagacatggccacgcag
tacgaagctcattcagatggacaggtgctggtgctgttggacatcacccccgatcagtcc
atggtggatgaaggcgtggctcgagaagtcatcaaccgcatccagaaactgcgcaagaag
ggtcatctggtgccatcggatgagatcaccgtgtattacagctctgaacctgctggtgat
tacctccacaaagtcgtccaagctcacacggacttcatcttagccactacaaaggcccca
ctgaaaccgtaccccgttccccaaaacgccagcgtgatcgtccaggagaaaactcagttg
aagggttccgatctggatctgaccatcgttaagggggcgtgggcttccagagcgcccctc
gacggcccttcgtgcgcttacgtcaacctcagggtcaaacagcaagaaggcgtggttctg
ctggagaatccgaagggagataacacactgaccgtggagaagctgaagatggtttgccgc
agcatttttaaactcgacgcttcagctttgaccgtgtttaatggggcagcagagctgaag
agcggcgctgatctcctggctctgagcgggaaaactctgtgtgtgacgtccggcgctcgt
cctccagaatcgaccggctccgactctctgctgtgtccctacatcaatctgcaactaatc
aacacccctcctgcagagtgccagacgggtgacgtcgggatgctgctgctcgccaacccg
gcgggtcagaacggcctccagcacgccgccctcatcgctgaagctgctaaagtgttcggg
ctcagaggaaggagactcaaactctacacagaccaggatcttactgaagaacttctgact
gaaacctctgtgaagaacctgaacacaaagaccttatatgtgaaagtcctgcccaccact
gcagaagcatag
DBGET
integrated database retrieval system
