Trichomycterus rosablanca: 134302291
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Entry
134302291 CDS
T09921
Symbol
fyco1b
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1 isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134302291 (fyco1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134302291 (fyco1b)
Membrane trafficking [BR:
trn04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
134302291 (fyco1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
Motif
Other DBs
NCBI-GeneID:
134302291
NCBI-ProteinID:
XP_062843412
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All DBs
Position
25:complement(16049568..16071488)
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AA seq
1331 aa
AA seq
DB search
MASVTVGESQLQRIIRDLHDAVSELIKEHQDSGEPITDDCDSLHKFSYKLEYLLQFDQKE
KTTFLGSRKDYWDYFCECLAKIKGANDGIRFVKSISELKTSLGKGRAFIRYCLVHQRLAD
TLQQCLMNQRVTCDWYYARSPFLKSQFNVDIINHLYELNGVQFDVASRGYDLDSEWPTFA
RRTLGSVVSASHVWKPPSRCSSVNSLVSNFSQQAQEFHQGPDLGTSLTGDSGEQELALSD
AEGLRIELDQSELSQRRLQEKVHLLQKEVGDLQEKLLAAESDRNLKKNDGLTDLSEKPND
KKTSDGTSSKKGEQVEKDLKIEELLSKLKLTEVEKLEAKRESEDRSRQAEKLAQQLKTKE
EKLKETEEMLAQRKKEDGNNELLKVDELQATVNRLQEELSLKQEEMQNLRTQLKDLRSSF
EARGHQLEDIKKKVLEERQELQQKSKSLKESLDCQILSLQEQLKRKEMELSVSTQKIQQL
ESQSKKLDEYKAQCTSLMENNAKLVHTLKKSEDSTRELVETRAALEKEVATLRASEKQLI
SKLDSSPLTVEEKKKLLEENQTVKGNLQKAKQESELNEEQTKSLEKQNKDLQACTIEKQG
GSEDHKKDSNLDQHFKPEEASSHMALVVAQLELNMKEVSRLQEEVIELRAQLQVTSEEKM
KLQALQEVTEASLENFCAQTEQLKSQVEELNRRHVEELLRCRESEEALEKELKHEAQVQA
NLQAQAASMKEELQALRSQNSTLLLETEEFKEALDRANTETAQLGVQVCVLSGQNEEASL
HGEELLTRLKELEEMHKEEQNLRDSVQALTKENAQLTEELKQKEGLSKITQELKQRLNEA
REESMSLRRSHQKEVNALRLQLDESTTNLQNQIKALNEELLDVRSQMKAGQEKASPLETR
LAELEAINISLSKEVEEKNACVLKSDALLQQKEEELNQIRGNFTRAQEKLASSQKACQDL
GENLRKKVQEQEMFALKASAEVEDLCRTKKNLEERLIELIREKDVLWKKSDALEFEQKLR
AEESDRELPYCFECHAQFSWWLRRHNCRLCGRPFCYSCCTHVVSSQQGGTKERCCKECFT
RHSTAERHSQGELGSPSQPSHSPLASTPTRTSMPSVTVALRSPRLDDAAFDVITDEEVNW
LHESDSLPYTTALSPGSMQHGTHDMSSSTSGGDLTADESEDLPTSAQDAEICLLKSGELT
QSVPFSMDEVCRFGEKAKELFIKSGCYSQIPVTVSTAGSTICWMFSSAPKSISFSVVYQE
SVDTPLEQAKVLIALTRCLSHKQLIQGEVKARNPGVYLLIFDNSFSRFISKRVQFKLSVE
QPGSAEGSESS
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtaacagtgggggaaagtcagctccagcggataatcagagacctgcatgat
gcagtttctgagctgattaaggagcaccaggacagtggggaacccataacagacgactgc
gacagccttcacaagttctcctacaaactggaatatttactgcagttcgaccagaaagag
aagacaacgttcctgggcagccggaaggactactgggattatttctgcgagtgcctggcc
aaaataaaaggcgctaatgatggtatccgcttcgtcaagtctatttctgagctgaagacg
tcactgggaaaggggcgagccttcatccgctactgcctggtgcaccagagactggcagac
acacttcagcagtgtctgatgaaccagagagtcacatgtgactggtactacgctcgcagt
ccttttctaaagtcccagttcaatgttgacatcatcaatcatctgtatgagctgaacgga
gtccagtttgatgtggcgtccagaggatatgatctagattcagagtggcccactttcgcc
agaaggactttgggttcagtagtttcagcctcccatgtgtggaaaccaccaagccgctgc
tcaagtgtcaacagtctcgtcagcaacttctcacagcaagcccaggagtttcatcaaggc
cctgacctgggtacgagtttgacaggcgactcaggagaacaagaacttgcccttagcgat
gcagaaggtctgcgtatcgagctcgatcagtccgagttatcgcaacgtcgtctccaagag
aaggttcacctgcttcagaaggaggtcggtgatctccaggagaagctactcgctgctgaa
agtgacagaaacctaaagaagaatgacggattaaccgacttgtcagagaaaccgaatgac
aagaagacgtctgacgggacatcgagcaagaagggcgagcaggtcgagaaagacctgaaa
atcgaagagctgctcagcaaactgaagttgacggaggtggagaaactcgaggccaagcga
gagagcgaggatcggtccagacaggctgagaaactggctcagcagcttaagaccaaggaa
gaaaagctgaaggagacagaggagatgctcgcccaacgaaaaaaagaggatggaaacaat
gagctcctgaaggttgatgagctccaagcaaccgttaatcgcctccaagaggaactgtca
ctgaagcaagaggagatgcagaacctacgtacacagctgaaggacctgcgaagctcattt
gaagcgagaggtcaccaattggaggacatcaagaagaaggtgctggaggagcgtcaggag
ctgcaacagaaaagcaagagcttaaaggagtccctcgattgtcagatcttatctcttcag
gagcagctgaagaggaaggagatggagctttcagtcagcactcagaaaatccagcagctg
gaaagccaaagcaagaaactggatgagtacaaggcccagtgcaccagcctgatggagaac
aatgcaaaattggtccatacgttaaagaagtctgaggacagcaccagggagctggtggag
accagggcagctcttgagaaagaagtggccactttgagggcttctgagaagcagctcata
tcaaagctggattcatctccattgacggtggaggaaaagaagaagctacttgaggagaac
caaactgttaaaggaaaccttcagaaagcaaagcaagagagtgagttgaatgaagagcag
acaaaaagtctggaaaagcaaaataaagatcttcaggcgtgtacgattgagaaacaggga
gggtcagaagaccacaagaaagactccaacctagaccagcactttaaacctgaagaagca
tcttctcatatggctttggttgtggctcagctagagctaaacatgaaggaagtctccagg
ctccaggaagaagtcatcgagctccgagcccagcttcaggtgacctcagaagaaaagatg
aagctccaggctcttcaggaggtaacagaggcctctctggagaacttttgcgctcagaca
gagcaacttaaatcccaggtagaggagctgaaccggcggcatgtagaggagctcttacgc
tgcagagagagcgaggaagcactcgaaaaggagttaaaacatgaggctcaggtccaagct
aacctacaggctcaggcggcctccatgaaggaggaacttcaagctctgaggagccagaac
agcaccctcttactggagactgaagaattcaaggaggccctcgacagagcaaacactgag
accgcacagctaggcgtccaagtttgcgtgctgagtgggcaaaacgaggaggccagtttg
cacggcgaggagctcctgaccaggctgaaagagctggaggagatgcataaggaggagcag
aacctcagggactctgtacaggctctgaccaaagaaaatgctcagcttacagaagagctg
aaacagaaagaaggtctttccaaaatcacgcaggagctaaagcagaggctgaacgaagca
agggaggagagcatgagtttgagaaggagccaccagaaggaggtcaacgcacttcggctt
cagctggacgaatcgaccacaaacctgcagaaccagatcaaggctttgaacgaagagctt
ctggatgtgaggtctcagatgaaagcagggcaggagaaagcgtcccccctggagaccaga
ctggcagagcttgaggccatcaacatcagtctcagcaaagaagttgaagagaaaaatgcc
tgcgttttgaaatcggacgcgttgcttcagcagaaagaggaagagctcaaccaaattcga
ggaaacttcacgagggctcaggagaaacttgctagcagtcagaaagcctgccaggacctc
ggtgagaacctgcgaaaaaaagtccaggagcaggagatgtttgctttgaaggcatctgca
gaggtagaggatctctgccgcacaaagaagaacctggaagaacggctcattgagcttatt
cgggagaaggatgtattgtggaagaaatccgatgctctggagtttgaacagaagctgaga
gcagaggagtcggacagagagcttccctactgcttcgaatgccacgcacagttcagctgg
tggctacgcagacataactgccggctgtgcggtcgacctttctgctactcctgctgcact
catgtagtgagcagccagcagggcggcactaaggagcgctgctgtaaggagtgctttaca
cgccacagtacggcagagcgccactctcagggggagctgggaagcccgtctcagccgtca
cacagcccgctggcgtccactcccaccagaaccagcatgccgagtgttacagtggcactg
cggtcccccaggctggacgacgcggcgttcgacgtcatcacagacgaggaggtgaactgg
cttcacgagagcgactcgctgccgtacaccaccgccctgtcacctggaagtatgcagcac
gggacacacgacatgagcagcagtacgagcggcggtgaccttaccgcagacgagtccgag
gatctgccaacctcagcgcaggacgcagagatctgcctgctcaagtctggagagctcacg
cagtctgtaccattcagcatggatgaggtctgtaggtttggtgagaaagccaaagaactt
ttcataaagtcaggctgttacagtcagatccccgtcaccgtgagtacggccgggtccacc
atctgctggatgttctcctctgccccaaagagcatctcattcagcgtggtgtatcaggag
agcgttgatacgccactcgaacaggctaaggtactgattgccttaacgagatgcctctct
cataagcagctgatccagggcgaggtgaaagcacgcaatccaggggtctacttgctcatt
ttcgacaactccttctccagattcatctctaagagagtgcagttcaaactcagtgtggag
cagccggggtctgctgagggcagcgagtcttcgtaa
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