Trichomycterus rosablanca: 134304050
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Entry
134304050 CDS
T09921
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
trn
Trichomycterus rosablanca
Pathway
trn04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134304050 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
trn04052
]
134304050 (bdnf)
Cytokines and neuropeptides [BR:
trn04052
]
Cytokines
Growth factors (RTK binding)
134304050 (bdnf)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
NTF3_N
Motif
Other DBs
NCBI-GeneID:
134304050
NCBI-ProteinID:
XP_062845665
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All DBs
Position
27:4095180..4137545
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AA seq
274 aa
AA seq
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MGPLVRHLAPPKLKFQQVRRVMTILFLTMVISYFSCLRAAPMREVPGIVGGHRAEGFLGA
ARGHGTPPSGGALPSLTDTFEQVIEELLEVEGEAAQGQGGGGPSNGAAAESKDVDTYASR
VVISNQVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPARRGELSVCDSISQWVTAVDK
KTAIDMSGQTVTVLEKVPVANGQLKQYFYETKCNPLGYTKEGCRGIDKRHYNSQCRTTQS
YVRALTMDSKRKIGWRFIRIDTSCVCTLTIKRGR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgggacctctggtccggcacctagcacctcccaaattgaagttccaacaggtcagaaga
gtgatgaccatcctgttccttactatggttatttcatacttcagttgcctgagagctgcg
cccatgagagaggtgccgggcatcgtggggggccaccgagccgaaggctttctgggggcc
gcccggggccatgggactccacccagcgggggggcgctgccctcactcacggacacattc
gagcaggtgatcgaggagctactggaggtggagggggaggcagcgcaaggtcagggaggg
gggggtcccagcaacggcgccgcggccgagtcgaaggatgtcgacacgtatgcttcgcga
gtggtgatcagcaaccaagtgcctttggagccaccactgctctttctcttggaggaatac
aaaaactacctggacgccgccaacatgtccatgcgcgttcggcgccactcggacccggcg
cggcgcggcgagctcagtgtgtgcgacagtattagccagtgggtgacggccgtggacaaa
aagacagcgattgatatgtccggccagacggtgactgttctggagaaggtcccggtggcc
aacgggcagctgaagcaatacttttacgagaccaaatgcaacccactgggttacacgaag
gagggctgtagaggaatagacaagcggcactataactcacaatgccggacaacccagtcg
tacgtgcgagccctcaccatggatagcaaacggaagattggctggaggtttatacggata
gacacttcgtgtgtatgcacattgaccattaagagggggagatag
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