Trichomycterus rosablanca: 134310974
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Entry
134310974 CDS
T09921
Symbol
setdb1b
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-B
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn00310
Lysine degradation
trn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
134310974 (setdb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134310974 (setdb1b)
Enzymes [BR:
trn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
134310974 (setdb1b)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
134310974 (setdb1b)
Heterochromatin formation proteins
Other heterochromatin formation proteins
134310974 (setdb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_4
DUF5604
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
Motif
Other DBs
NCBI-GeneID:
134310974
NCBI-ProteinID:
XP_062848844
LinkDB
All DBs
Position
3:complement(14828300..14854407)
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AA seq
1218 aa
AA seq
DB search
MELDPGLGSALDMELGPELEEELGISLDELRKWIEEQVDSSETVKHRKAQLAELQDWVEQ
KEKDIATVDTLCCNASESVVQCEVLVKELYSKIGLEYRESSSEDDEGVDGGGASEIIEID
DDDDDDDDDDDEDDDVIAVGCVVPPKKTPGKDSTLMETSAALHRTSQQVHSLMHTISKGS
STALTPPKGLAPPPQSPRGSMLNIPAVFMSSGPGHGPTQPNPALKQDVMKLNMSILGKKR
TKTWHRGILVAINSVGNSFKYKVKFENKGKSLLSGNHVAFDYHPTLERLYVGARVVAKYK
DGNQVWLYAGVVAEMPNSKNRMRFLIFFDDGYASYVALPDLYPVCRPLKKTWEDIEDESC
RDFIEEYITAYPNRPMVLLKPGQIIKTEWEGTWWRSRVEEVDGSLVKMLFLDDKRSEWIY
RGSTRLEPMFNLKMSTANHQEKKLAGQQRFRPNMGAVRAKGPVVQYTNENSLLVNRLPLA
QPVPPRPQLAAPIQPIRAEIQMAKKSTSPYIPAPRHLVTTDLQIRPVGNLIQQTHNPRFF
LLQTGTVQGLTTILPSLPSLPSLQPVQSAVTAYASERVPQEPSYQAPNDRLFYMAHVCTP
ECLKRIRPTRPDLHRGRNPLLTPLLYEFRRMTARRRLNRKMSFHVIYKSPCGLSLRNMTE
IQRYLFQTHCDFIFLEMFCLDPYVLVDRRFQPQRPFYFIRDITAGREDIPLSCVNEIDNT
PPPSVAYSKERIPEDGVFINTSDNFLVGCDCTDGCLDKSKCSCHQLTLQATGCTPGAQIN
PNAGYNYKRLDECLPTGMYECNKQCRCNPQMCSNRLVQHGLQVRLQLFKTQNKGWGIRCL
DDVAKGSFICIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESEAHCSDSE
GSGVDMNQVKMSTTARNAQKTEGSNRKSQGSSDSDESEDDKEESNGDESDSSDDTFVKDT
YYSSSSVWRSYTTRRQTKGMKEESQDSKDGLSTSGGGTEDRKPPPVPEECGKSKVASWLT
GQSATPGAQSVKEEQAVKTEKKEVMTLSDSDDVQTISSGSEENKERVKKPQVVVKRQVAV
KSTRGIALKSSHGMMVKTGGGGGGGTRANQNKEANAGDGVSKSTRQFYDGEESCYIIDAK
LEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVE
GKELLCCCGSTECRGRLL
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atggaactggatccaggtctgggatcagctctggacatggagctgggacccgagctggag
gaggagctgggcatatctctggatgagctgcgcaagtggattgaggagcaggtggacagc
agcgagactgtgaagcacagaaaggcccagctagctgaactgcaggactgggttgagcaa
aaagaaaaagacattgcaactgtagacacgctgtgctgcaacgcatcagagtctgtagta
cagtgtgaggttctagtgaaggagctgtacagtaaaataggtcttgaataccgggaaagc
agctcggaagacgacgaaggagtagatggtggtggcgcttcggagatcattgaaattgat
gatgacgacgatgacgacgatgatgatgacgacgaagacgatgatgtcattgccgttggc
tgtgtggttccaccaaagaagactccaggcaaagattcaacgctaatggaaacgtcagca
gcacttcataggacctcacagcaagttcacagcctgatgcacaccatcagtaagggctcg
tccacagcgctcacaccccctaaaggactcgccccgcctcctcagtccccacggggcagt
atgctgaacattcctgccgtgttcatgtcctctggcccgggacacggacccacccagccg
aacccggccctcaaacaggatgtcatgaagcttaacatgagcattctggggaaaaagcgc
accaagacctggcatcgtggaattttggttgctatcaattcagttggtaacagctttaag
tacaaggtgaagtttgagaataaagggaaaagcctgctgtctggcaaccatgtggcattt
gactatcacccaacactggaaaggctgtatgtgggtgctcgcgttgttgccaaatacaag
gatggcaaccaggtgtggctctatgctggcgttgttgcagagatgcctaacagcaaaaac
cgtatgaggtttctgatcttttttgatgatggctatgcttcctatgtggccttgccggat
ctctaccctgtctgcagaccattgaaaaagacatgggaggacatagaggatgagtcatgc
agggactttattgaggagtacattactgcatacccaaacagacccatggtgctgctgaag
cctggtcagataatcaagacagaatgggagggcacatggtggaggagccgagtggaggag
gtggacggcagtctcgtcaaaatgctctttctggatgataagcggagtgagtggatctat
cgtggctccacccggctagagcccatgttcaacctgaaaatgagcacagccaaccatcag
gagaaaaagctggctggccagcagcgcttccgacccaacatgggagctgtaagggctaaa
ggacctgtggtgcagtacaccaatgaaaacagtttgcttgtcaaccgcctcccactcgct
cagcctgtaccacctcgtccacagcttgctgctcctatacagcctatccgtgctgagatt
cagatggcaaagaagagcacctctccatacatccctgcccctcgccatcttgtcacaact
gatctacagattagacctgttggcaacctgatccaacaaacacacaatcccaggttcttc
ctcctacagacggggacagtgcagggactaacgaccatccttccgtcactgccgtcactg
ccgtcactgcagccagtgcagtctgcggtaacggcgtatgccagcgagcgggttcctcag
gagccgtcttatcaggcccctaatgatcgtctcttctacatggcccacgtgtgtactcct
gagtgtctgaaacgcatccggcccacacggccagacctgcaccgtggcagaaacccgctc
ctcactccgctgctgtacgagttccgccgaatgaccgcccgccgtcgtctgaaccgcaag
atgtccttccacgtgatctacaagtcaccgtgtggcctgagcctgaggaacatgacggag
atccagcgctaccttttccagacacactgtgacttcatcttcctggagatgttctgtctg
gacccgtacgtcctggtggaccgtcgcttccagccccagagacccttctatttcatccgg
gacatcacagccggacgcgaggacatccccctgtcctgcgtcaatgagatcgataacaca
cctccacctagtgtggcttacagtaaagaacgcataccagaggacggagtctttatcaac
accagtgataattttctggtggggtgtgactgcactgacggctgcctagacaaatcaaag
tgttcttgccaccagctgacgctgcaggccacggggtgtactcctggagctcagatcaac
cccaacgctggatacaattacaagaggctcgatgagtgcttacccacaggcatgtatgag
tgcaacaagcagtgccgctgtaatcctcagatgtgctccaaccgcttggtgcagcatggc
ctgcaggtgcgcctgcagctctttaagacccagaacaaaggctggggcatccgctgcctg
gatgatgtagccaaaggctcttttatctgcatctatgcaggaaaaatcctcacagatgac
tttgcagataaggagggcttggaaatgggcgacgagtactttgcgaacctggaccacatt
gagagcgtggagaactttaaggagggttatgagagtgaggcacactgctcagacagcgag
ggcagcggcgttgacatgaaccaggtcaaaatgtcaaccacagccaggaacgcccagaag
acagagggcagcaaccgcaaaagccaaggttcttctgacagtgatgaaagcgaagatgac
aaggaggagtccaacggtgatgagagtgacagttcagatgacacgtttgtaaaagacact
tactactcctccagctctgtgtggagaagctacacgactcgtcgacagacgaagggcatg
aaggaagagagtcaggacagtaaggatggactaagcacatcaggtggaggaacggaggac
aggaagcctcctcctgtgccagaggagtgtggaaaaagtaaagtggcatcatggttgacc
gggcagtcagccactcccggagctcagagtgtcaaagaggaacaagcggtgaagaccgag
aagaaggaggtgatgactctgtctgacagtgacgacgtgcaaactatcagctctgggtcg
gaagaaaacaaagagcgggtgaaaaagcctcaggtggtggtgaagaggcaggtagcagta
aaatctacgcgaggcattgctttgaagtcttcacacggcatgatggtgaaaacaggagga
ggtgggggcggtggcaccagagccaatcagaataaagaggccaatgccggagacggtgtc
tccaaaagcacacggcagttttatgatggggaggaatcgtgttacatcattgatgccaaa
ctggagggcaacctgggacgctacctcaaccatagctgcagtcccaacctgttcgtccaa
aatgtatttgtggacacgcatgacctgcggtttccatgggtggccttcttcgcaagcaag
agaatccgtgctggaaccgagctgacttgggattataactatgaagtcggcagcgtggag
ggcaaagagctgctgtgctgctgcggctccaccgagtgccgagggcgactgttataa
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