Trichomycterus rosablanca: 134312192
Help
Entry
134312192 CDS
T09921
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134312192 (dhx9)
03012 Translation factors [BR:
trn03012
]
134312192 (dhx9)
Enzymes [BR:
trn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
134312192 (dhx9)
5.6.2.6 RNA 3'-5' helicase
134312192 (dhx9)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
134312192 (dhx9)
Translation factors [BR:
trn03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
134312192 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
nSTAND3
AAA_22
AAA_14
ATPase
Motif
Other DBs
NCBI-GeneID:
134312192
NCBI-ProteinID:
XP_062849993
LinkDB
All DBs
Position
4:9006194..9047320
Genome browser
AA seq
1262 aa
AA seq
DB search
MGDIKNFLYAWCGKKKLTPSYEIRAAGNKNRQKFMCEVRIEGFNYMGMGNSTNKKDAQAN
AARDFVNYLVRVGEISASEVPALGVSVPDSGGQEGGGFGTLPESGPLPPHLMVKEEPGIE
QSSGPVPGVTGLGYSGPQKAQWDRGANLQDYYSRKEEQDAQATLESEEVDLNAGLHGNWT
LDNAKARLNQFFQKEKIQTDYKYSQVGPDHNRSFIAEMTIFVRQLGRKISSREHGSNKKI
AAQSCALSLVRQLYHLGVLEAFTGQSKKKEGESVEVYNVNISDDLGQQLRSVIQELNIFI
PPPDPSGPVSLIQGKLAHFEPSQKQNFGGVVQWSPPQVNWNPWTSSNIDEGPLAFCTPEQ
ISTDLQGELNYQLEQDKCLQERLNERRQLPVKKFEEEIMRTINSNPVVIIRGATGCGKTT
QVPQYILDQFIQESRASDCNIVVTQPRRISAVSVAERVAYERGEDLGKSCGYSVRFESIL
PRPHASILFCTVGVLLRKLESGIRGISHVIVDEIHERDINTDFLMVVLRDVVQAFPEVRI
VLMSATIDTTMFREYFFNSPIIEVYGRTFAVQEYFLEDCIQMTQFIAPPNDRRKKDKDEE
GGEEEVNCNLTCGPEYGPETKRSMAQLNEKETSFELIEALLKYIETLKGPGAVLVFLPGW
NLIYAMQKHLEMNPHFGSHRYKILPLHSQIPREEQKRVFEPSPDGVTKVILSTNIAETSI
TINDVVYVIDCCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVSPGFCFCLCSRA
RFERLETHMTPEIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRALD
ALDTNDELTPLGRILAKLPIEPRLGKMMIMGCILNVGDAICTIAAASCFPEPFISEGKRL
GFVHRNFAGNRFSDHVALLSVFQAWDEVRMGGEDAESRFCDHKRLNMSTLRMTWEAKVQL
KDILINSGFPEECLLNQMFSNMGPDNNLDVVISLLTFGNYPNVCYHKEKRKILTTEGRNA
LIHKSSVNCPFTNHDMTYPSPFFVFGEKIRTRAISAKGMTMVSPLQLILFGSNKITSDGE
IVELDEWIKLRIPHEVAGGIAALRAGMEALVVEVTKDPEYIRNIDPANERLLNTIRLLSR
PSSAGLNLMISNQRFGDGPRPPKMSRLDGDGGFRGRGGGYRGGGGYGGGGGGYRGGGGGY
RGGSGGGYRGGGGYGGSGGYRGGGGYRGSGGYRGGGGGGFGGGGDGFGGGGRGSNRGGGG
GF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgggggacatcaaaaacttcctgtatgcctggtgtggaaagaagaaattgacgcccagc
tatgaaatccgggcggctggaaataaaaacaggcagaaattcatgtgtgaggtacgaatt
gaggggtttaattatatgggaatgggaaactccaccaacaagaaagacgcccaggccaat
gcagcaagggattttgtgaactatcttgtcagggtgggggagatcagtgcttctgaggtg
ccagctttaggggttagtgttcctgatagtggtggtcaagaaggtggtggatttggaaca
ttgccagagagtggtcctttacctccacatttaatggtcaaggaagagccagggatcgag
cagagctcaggtcctgtacctggggtgactggtcttggatactcaggacctcagaaagca
cagtgggatcgtggagcgaacctgcaggattactacagcagaaaggaggaacaggatgca
caagctacactggagtctgaggaggttgatttaaatgctggtctgcatggcaactggacc
ctggataacgctaaggctcgtctaaatcagttcttccaaaaagagaaaatccagacggat
tataaatacagccaagtggggccggaccacaacaggagcttcattgcagaaatgactatc
tttgtaagacagctgggtagaaaaatctcttcacgtgagcacggctccaataaaaagata
gcggcacagtcgtgtgctctctccctggtccgacagctctaccatctgggtgtcctcgaa
gcgtttacaggacagtccaaaaagaaggaaggagaaagtgtggaggtttataatgtgaac
atcagcgacgatctgggacaacagctccggagcgtcatccaagagctcaacatattcatt
cctcctcctgacccaagtggtccagtgtctttgatccagggaaaactggcccacttcgag
ccctcgcagaagcagaattttggaggcgtggtgcagtggtctccccctcaggtcaactgg
aatccttggaccagcagcaacattgacgagggacctctggcattctgtacaccagagcag
ataagcacagacctacaaggtgagctcaactaccagcttgaacaagacaagtgtcttcag
gagaggttaaatgagcgacggcagctgcccgtcaaaaaatttgaggaggagatcatgcgc
accatcaactcaaatccagtagtgatcattcgaggcgccacggggtgtggcaagaccacc
caggtgccccagtatattctggaccagttcatccaagaaagcagggcctctgattgcaac
attgtcgtcacccagcctcggagaatcagcgcggtgtccgtggcggagcgggtggcatac
gaacgaggtgaagatctggggaagagctgtggctacagcgtacgcttcgagtccatcctg
cccaggcctcatgccagcatcctattctgcactgtcggggtgctgctgaggaagctggag
tcaggaattcgaggcattagccacgtaatagtggatgaaatccatgagagagacatcaat
accgatttcctcatggtcgtcttaagagacgtggtccaggcttttcccgaggtccgcatc
gtcctcatgtcggccaccatcgacaccaccatgttcagagaatacttctttaactccccc
atcatagaagtctatggacgcacatttgcagttcaggaatatttcctggaggactgcatt
cagatgacccagtttattgcacctccaaacgacaggaggaaaaaagataaagacgaggaa
ggcggcgaggaggaggtgaactgtaaccttacgtgcggtcccgagtacggtccggaaacc
aagcgctccatggctcagctaaacgagaaggaaacttcattcgaactgattgaggccctg
ctgaagtacatagagacactgaagggtccaggggccgtgctggtcttcttgcctggctgg
aatctcatttacgccatgcagaaacacttggagatgaacccacacttcggaagccaccgc
tacaagattctgcccctccactcgcagatccccagagaggagcagaagagggtgtttgag
ccttcacctgatggagtcactaaggtcattctgtcaaccaatatagcagagaccagcatt
accattaacgacgtggtctatgttattgactgctgcaagcagaaggtgaagctgttcacc
tcccacaacaacatgaccaactacgccacagtgtgggcctccaagaccaacctggagcag
agaaagggtcgagccggtcgtgtcagcccaggcttttgcttctgcctgtgcagcagagca
cgcttcgagagattggagacccacatgactcccgagatcttccgcactccgctgcacgag
gtagctctcagcatcaagctgctcaggctgggcggtatcggccacttcctgtccaaagca
atcgagcctcctccactggatgctgttatcgaggctgaacacaccctcagagctctggat
gccctggacaccaacgatgagctgaccccacttggacgcattcttgccaaactgcccatt
gagccacgtctgggaaagatgatgatcatgggctgcattttaaatgtgggagatgccata
tgcaccatcgcggcggcgtcctgcttcccagagcctttcatcagcgagggcaagcgtctg
ggttttgttcataggaactttgcagggaatcgtttctctgaccatgtggccctgctttct
gtctttcaagcctgggatgaagtcaggatgggtggtgaggatgctgaaagcaggttctgt
gaccacaagcggctgaatatgtccactttaaggatgacctgggaggccaaggtccagctg
aaagatattcttatcaactcaggtttccctgaagagtgcctgctgaatcagatgttttcc
aacatggggccggacaataacctggacgttgtgatctccttgttgacctttggtaactac
cctaatgtgtgttaccataaagagaagaggaaaatcctgaccactgagggtcgaaatgct
ctcatccacaagtcctctgtgaactgccctttcaccaaccatgacatgacctacccatca
ccgttcttcgtcttcggagagaagattcggacccgggctatatcggccaaaggaatgacc
atggtcagcccgcttcaactcatcttgttcggctctaacaaaatcacctctgatggggag
atcgttgagcttgatgaatggatcaaactgcgtattccgcatgaagtcgccggtggcatc
gctgcactcagggctggaatggaggctctggtggtggaggtgaccaaagaccccgaatac
atcaggaatatcgatcccgccaacgagcggctcctgaataccatccggctcctctccaga
ccctcgtctgcaggactcaatctcatgatcagcaatcaacggtttggagatggtcccaga
cctcccaagatgtctcggttagacggagatggtggcttcagggggcgtggaggaggctac
agaggaggtggaggatacggcggcggcggcggaggataccgtggtggaggaggaggatac
cgaggaggcagtggtgggggataccgtggtggcggagggtacggagggtccggcggatac
aggggcggaggtggatacagggggtccggagggtacagaggtggtggtggaggcggattc
gggggcggcggagacggattcggaggaggtgggcggggctctaatagaggtggtggaggc
ggattttga
DBGET
integrated database retrieval system
