Trichomycterus rosablanca: 134316304
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Entry
134316304 CDS
T09921
Symbol
snrpb
Name
(RefSeq) small nuclear ribonucleoprotein-associated proteins B and B'
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
trn
Trichomycterus rosablanca
Pathway
trn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134316304 (snrpb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134316304 (snrpb)
03041 Spliceosome [BR:
trn03041
]
134316304 (snrpb)
03032 DNA replication proteins [BR:
trn03032
]
134316304 (snrpb)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
134316304 (snrpb)
Spliceosome [BR:
trn03041
]
Complex A
U1 snRNP components
Sm proteins
134316304 (snrpb)
U2 snRNP components
134316304 (snrpb)
Complex B
U1 snRNP components
134316304 (snrpb)
U4/U6.U5 tri-snRNP components
134316304 (snrpb)
Complex C
U2 snRNP components
134316304 (snrpb)
DNA replication proteins [BR:
trn03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
134316304 (snrpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
134316304
NCBI-ProteinID:
XP_062852719
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All DBs
Position
6:15284104..15288603
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AA seq
240 aa
AA seq
DB search
MTVGKSSKMLQHIDFRMRCILQDGRIFIGTFKAFDKHMNLILCDCDEFRKIKPKNSKQPE
REEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGVAGGPGVGRAAGRGVPAGAPM
AQAPAGLAGPVRGVGGPSQQVMTPQAGRGTVAAAAAGASIAGAPTQYPPGRGGPPPPPMA
RGAPPPGMMGPPPGMRPPMGPPMGMPLGRGAPMGMPPPGMRPPPPGMRGPPPPGMRPPRP
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcgggaagagtagcaaaatgcttcagcacatcgacttcaggatgcgctgtata
ttacaagatggtcgaatattcattggcacatttaaggcattcgacaaacacatgaacctc
atcctgtgtgactgtgacgagttcagaaagatcaagcccaaaaattcaaagcagccagag
agggaagagaagagggttttgggtctggtgctgctcagaggagagaatctcgtctctatg
actgtagagggaccccctcccaaagatactggtattgccagggtgccactggctggtgtt
gctggaggccctggtgtgggcagagcagcaggaagaggtgtaccagctggcgctccgatg
gctcaggctcctgctggtcttgctggaccagtaagaggagttgggggtccatcacaacag
gttatgactcctcaggcaggcagaggcactgttgctgcagcagcggccggtgctagcatt
gccggtgcacccacacagtacccaccaggcagaggtggtcctccacctcctccaatggca
agaggagcaccacctccaggtatgatgggtcctcctcctggtatgaggccacccatgggc
ccgcctatgggtatgccactgggtcgtggtgctcctatgggtatgcctcctcctggcatg
agaccgccacccccaggaatgaggggtccaccccctccaggcatgcgtccccccagacct
tga
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