Trichomycterus rosablanca: 134316322
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Entry
134316322 CDS
T09921
Symbol
pkp1b
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134316322 (pkp1b)
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
134316322 (pkp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Atx10homo_assoc
HEAT
Motif
Other DBs
NCBI-GeneID:
134316322
NCBI-ProteinID:
XP_062852750
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All DBs
Position
6:complement(17259555..17307933)
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AA seq
730 aa
AA seq
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MALEPLRSTLATMEVRETSLALPSEGSYRSGQQRVLEQVSTMRRNKGSKYGSKGSTGTLS
PTSPKSDSVFLDFKYSHYQNGSAPLFESSMTNGAVKMRQQNQGVMQRSVSARSASYQRSQ
RSLSGSNMFPSSPTTISPPYSPPEPYFASTGNLGYAAVSNNRWTRSIKQAKGTERYSQYP
LNRNGQIMANNSIHRNGNSSQFYSNQAISRRPLSTHSNPEPKFSTVTRSKSEMTGMNGET
GSAEITLADAVNWLRVDDKNYQLRGASFIQHSTFSDNKAKEEVLKLNGIEFLMSLLKSSN
IEIQEASASALRNLVLKHQANKDELRRLNGVTQVSNLLQESDSLQLQKHLTGLLWNLSSA
ESIQPSLLPQSVPILTRKVLQPYAAPSEITENSELQDEIFCYATGCLRNLSCGTKNIRQA
LRKCEGLIDSLVKHMQVFLDKESYNDKSVENCVCILHNLTYHLDTEETYLFHKMLPQVKA
LGTNDTDMGPIGCFSNQSRKLQQSGVDLSLLEEHNPKGSGLLIHSQTLQLYLHLLSSSKN
GTTLEACCGALHNLTAKKEPLSDIFSQIIVQRLNGMEHISTLLNSDNANLKRDIMTLVGN
LSRPPSVHRTIARHGVCGVLDNLSSAISSGAKESPQSDSTIAMTCNTANTLLMADPELAG
KSLKPDLINSLTELSQKTTMPKAQQAAALLLHSLWSEKNIQPHLKKLKFNKQTFVNETTL
SYLKSALVIE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggctttggaaccattaagatcgactttagcgaccatggaggttagagagacctcttta
gcgttgccttctgagggttcttaccgctcgggacagcagcgcgtattggagcaggtcagc
accatgagaaggaacaagggcagcaagtacggcagcaaaggatccacaggaaccctctct
cctaccagcccgaagagtgacagtgtgttcctggattttaagtactcccattatcaaaat
ggatcggcccctttgtttgagagctccatgacaaacggagctgtaaaaatgagacagcaa
aatcaaggggttatgcaaagaagcgttagcgccagatctgccagctatcagaggagccaa
agaagcctgagtggaagcaacatgtttcctagtagccccacaactataagtccaccctat
agcccacctgaaccttacttcgctagtactggtaatcttggctatgctgctgtttctaat
aaccgctggacccggagcatcaaacaagcgaaaggtacagagaggtacagccagtatcct
cttaacagaaatggccagatcatggcaaacaacagcattcatagaaacggaaacagcagt
cagttctattccaaccaggccattagtagaaggcctctttctacccactccaacccagaa
cccaagttctccacggtgaccaggagcaagagcgagatgaccggaatgaacggagagaca
ggctctgccgagatcacattagctgatgcggtgaactggctcagagttgatgataagaat
tatcagttgcgtggtgcttcctttattcagcacagcacgttcagtgacaacaaggccaag
gaggaggtactaaaactgaatggcatcgaattcctaatgtcccttcttaaaagctccaac
attgaaatccaggaggcgtctgcgtccgccctgcgtaaccttgtcctcaaacaccaagcc
aacaaagacgagttgcggcgcttgaatggggtgacccaagtctcgaacttgcttcaggag
tctgacagtcttcagcttcaaaaacacttgaccggtcttctgtggaacctgtcctcagca
gagagcattcaacccagtctactacctcagagtgtgccaattctcactcgaaaagttctg
cagccatatgcagctccctcagagattacagaaaattctgaactgcaagatgagatcttc
tgctatgctacaggatgcctacggaatttaagctgtggcacgaaaaacatcagacaagct
ttgcgcaaatgtgagggccttatcgactcgcttgtcaaacacatgcaggtcttcttggat
aaagagagttataatgataagtctgtggagaactgtgtgtgtattctgcacaaccttacc
tatcatctggatacagaagaaacttacttgttccacaagatgttaccacaagttaaagct
ttaggtactaatgacacagacatgggccccataggctgcttcagcaaccagagtcgaaaa
ctgcagcagagtggtgtagacttgtcactgttggaggaacacaaccccaaaggcagcgga
ctacttattcattcacagacactgcagttatatctgcatctgctgagctccagcaagaat
ggtaccactctggaggcatgctgtggagcgctgcataacctcaccgccaagaaggaacct
ttgtcagatatatttagtcagatcatcgtacagaggttgaatggtatggagcacatctca
actttgctgaactcagacaacgcaaatttaaagagagacatcatgacactggtggggaac
ctctcccgaccaccaagtgttcacagaacaatagctcgccatggtgtttgcggagtcctt
gataacttaagctctgccatttcaagtggtgctaaagagtcacctcaatctgacagcact
atagcgatgacctgcaacacggcaaacaccctgctgatggcagatcctgagttggcagga
aagagtctaaaacccgacttgatcaactcactgactgagcttagtcagaaaacaaccatg
cccaaggcacaacaggcagcagcacttctccttcacagcctttggtctgagaaaaacatt
cagcctcatctcaagaagctaaagttcaacaagcagacttttgtgaatgaaacaactttg
tcttatctgaagtctgctctggttattgaataa
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