Trichomycterus rosablanca: 134317598
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Entry
134317598 CDS
T09921
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn00310
Lysine degradation
trn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
134317598 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134317598 (prdm6)
03036 Chromosome and associated proteins [BR:
trn03036
]
134317598 (prdm6)
Enzymes [BR:
trn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
134317598 (prdm6)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
134317598 (prdm6)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
134317598 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_15
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
134317598
NCBI-ProteinID:
XP_062854381
LinkDB
All DBs
Position
7:complement(6181727..6224212)
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AA seq
563 aa
AA seq
DB search
MEMLKPGDQSGSAFLKVDPTYLQHWQQLFPQTQLKSCAIPQIPPDRGPVAAESLRQRPAL
ISSTSASVALTPASSSSCAPAVSALSGLTQLSAPQLALFSHTLCTDIPPTETPTPVQNKE
LSLQPSFIEKASQLKLTSEELDYYLYGQQRMEIIPLNNHANELNNRCDMCADNRNGECPM
HGPLHSLRRLVGTSSTSSTVPPPEVPEWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGT
WIGPFQGVPLLLDKLHIGAVRNTRHLWEIYDQEGTLQHFIDGNDPSKSSWMRYIRCARHC
GEQNMTVVQYRSCIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPPTVM
EAMSRQESLQPFSKTSKSSSSAMLQRSMVFPHSPCSRNFSLLDKAATESGFNQLNSKNQR
ILASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQ
PSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQL
SRHQRMPNECKPISDSSESIEVD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggagatgctgaagcccggggatcaaagcggctctgcttttctcaaagttgacccgacc
tacctccagcactggcagcagctttttccgcagactcagctcaagagctgcgcaatccct
caaatcccgcccgatcgaggtcctgtagccgcggaaagtctccgccagagaccggcttta
atctcctctacctccgcgtctgtcgcgttaaccccggcgtcctccagctcctgcgctcca
gcggtatcagctctgtctgggttaactcagctctcagcaccacagctagcactattctct
cacacactgtgtactgatataccccccaccgaaacaccgaccccagtccagaacaaggaa
ctttccctacagcccagctttattgaaaaagcgtcccaattaaagctgacctcagaggaa
ctggactattatctgtacggccagcagaggatggagattatcccgttaaacaaccacgcc
aacgagctcaataaccgctgtgacatgtgtgcagataaccgaaacggcgagtgccccatg
catgggcccttgcactcactgcgtcgcctggtaggaacaagcagcacctcctctactgtg
ccacctccagaggtgcctgagtggctgcgggacctacctcgagaagtctgcctctgcacc
agcaccgttcctgggctgggatatggcatttgtgctgcccagagaatcccacaggggaca
tggatcggaccctttcagggtgtccctctgctgctggataagctgcacattggagccgtg
cgcaacacaagacacctttgggagatctatgaccaggagggcacgttacagcactttatt
gatggcaacgacccaagcaagtctagctggatgaggtacatccgctgtgccagacactgt
ggggaacagaacatgacagtggttcagtacagatcgtgtattttctaccgggcttgtata
gacattcctcgaggaacagagcttttggtctggtacaacgacagttatacctcctttttt
ggcatcccactgcagtgcatcgcacaagatgaaaacttgaacgtgccgcccactgtaatg
gaggccatgtctcgacaggagagcctgcagcccttcagcaagacctcgaaatcctcttcc
tccgctatgctgcagcgctccatggtgttcccccactcaccctgctcacgaaatttctct
ctgctggacaaggccgccactgagtctggctttaaccaactgaattccaaaaaccagagg
atactggctagtcccacatccaccagccagctcaacagcgagttcagtgactggcacctg
tggaaatgtggccagtgcttcaaaaccttcacccagcgcattcttctccaaatgcatgtg
tgcacacagaaccctgacagaccgtatcagtgtggacactgctcccagtctttttctcaa
ccctcagagctgcgcaaccatgtggtaacacattccagcgacaggcccttcaagtgcggc
tactgcggccgagctttcgccggggccaccacgctcaacaaccacatccgcacacacact
ggagagaagccattcaagtgtgagcggtgcgagaggagcttcacgcaggccacgcagctc
agcagacaccagcggatgcccaacgagtgcaagcccatcagcgatagcagcgaatcaatc
gaggtggattag
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integrated database retrieval system
