KEGG   Trichomycterus rosablanca: 134318461
Entry
134318461         CDS       T09921                                 
Name
(RefSeq) mamu class II histocompatibility antigen, DR alpha chain-like
  KO
K06752  MHC class II antigen
Organism
trn  Trichomycterus rosablanca
Pathway
trn04145  Phagosome
trn04514  Cell adhesion molecules
trn04672  Intestinal immune network for IgA production
trn05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:trn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    134318461
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    134318461
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    134318461
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    134318461
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:trn04147]
    134318461
Exosome [BR:trn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   134318461
  Exosomal proteins of epithelial cells
   134318461
  Exosomal proteins of breast milk
   134318461
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 C2-set_2 ig I-set C2-set_3
Other DBs
NCBI-GeneID: 134318461
NCBI-ProteinID: XP_062855481
LinkDB
Position
7:complement(39021360..39028078)
AA seq 234 aa
MKFYMILFTLVCVRAQIKHEHMLISACSDTEKEFMYGIDGEENYYADFVKQKVVNMQPPF
ADLGELQDMYEQAVGAMELCKQNLQMVKSLYKDRPVPQDVPQNSIYSRDDVQVGSKSILI
CHSARFFPPSIHIYWTKNGENVTDGAELSQFYPNEDGTYNVFSHLSFTPEEGDVYTCTVQ
HKALQMPDTKTWEVDVDVKIPSIGPSVFCGVGLALGLLGVATGTFFLVKGNQCN
NT seq 705 nt   +upstreamnt  +downstreamnt
atgaaattctacatgattttatttacactggtgtgtgtgagggctcagattaaacatgaa
cacatgttaatatcagcgtgctcagacacagagaaggaatttatgtatgggattgatgga
gaggagaattattacgcagactttgtaaagcagaaggtggtgaacatgcagcctccattc
gctgatctgggtgagttacaggatatgtacgagcaagccgttggagcaatggagctctgc
aaacaaaacttacaaatggtgaaaagcttgtataaggaccggcctgtaccacaggatgtg
ccgcaaaactccatttattccagagatgatgtacaggtgggttcaaaaagcatcctcatc
tgccactcagctcgtttctttcctccatccattcacatttactggaccaagaatggtgag
aatgtgacagacggtgctgaactcagccagttttacccaaatgaggatggaacctataac
gtgttttcccacctgagcttcactccagaggaaggagacgtttacacatgtacagtacag
cacaaagccctgcagatgcctgacaccaaaacatgggaggttgatgttgatgttaagatt
cccagtattggtccgtctgtattttgtggagttggtctggctcttgggctgcttggagtc
gctacaggaacttttttcctagtcaaaggaaaccagtgcaactaa

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