KEGG   Trichomycterus rosablanca: 134318577
Entry
134318577         CDS       T09921                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, I-E alpha chain-like
  KO
K06752  MHC class II antigen
Organism
trn  Trichomycterus rosablanca
Pathway
trn04145  Phagosome
trn04514  Cell adhesion molecules
trn04672  Intestinal immune network for IgA production
trn05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:trn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    134318577
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    134318577
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    134318577
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    134318577
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:trn04147]
    134318577
Exosome [BR:trn04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   134318577
  Exosomal proteins of epithelial cells
   134318577
  Exosomal proteins of breast milk
   134318577
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3 Ig_2 ig I-set
Other DBs
NCBI-GeneID: 134318577
NCBI-ProteinID: XP_062855648
LinkDB
Position
7:complement(39052174..39069668)
AA seq 232 aa
MKFYLILFTLVCVRAQIKHEHLGITACSDTEKEDMFGADGEESFYADFVKKEEVNMLPPF
SDPIGYPGYYDQAAADMEICKQNLQVLIKDYKDEPVAQAAPQTSIYTKDDVQLGSGTTLI
CHAARFFPPPIRVHWTKNSVNVTDSAMLSQYYPNKDNSYNQFSHLSFTPKEGDIYTCTVE
HKALQTPDTKTWDVNVEMPSIGPSVFCGVGLALGLLGVATGTFFLVKGNQCN
NT seq 699 nt   +upstreamnt  +downstreamnt
atgaaattctacctgattttattcacactggtgtgtgtgagggctcagattaaacatgaa
cacttgggaataacagcgtgctcagacacagagaaggaagatatgtttggtgctgatgga
gaggagagtttttacgcagattttgtaaagaaggaagaagtgaacatgctgcctccattc
tctgatccgatcggttatccaggatattacgatcaagccgctgcagacatggagatctgc
aaacaaaacttacaagtgctgataaaggactataaggacgaacctgtagcacaggctgcc
cctcaaacctctatttatacaaaggatgacgtgcagctgggatcaggaaccaccctcatc
tgccatgcagcacgtttcttccctccacccatccgtgtgcactggaccaagaatagtgtg
aatgtgaccgacagtgccatgctcagccagtactacccaaacaaggacaacagttacaac
cagttctcccacctgagcttcacacctaaagaaggagacatttacacatgcacagtggag
cacaaagccctgcagactcctgacaccaaaacatgggatgttaatgttgagatgcccagt
attggtccgtctgtattttgtggagtgggactggctcttggactgcttggagttgctact
ggaactttcttccttgtcaaaggaaaccaatgcaactaa

DBGET integrated database retrieval system