Trichomycterus rosablanca: 134319083
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Entry
134319083 CDS
T09921
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
134319083 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trn03400
]
134319083 (tdg.2)
Enzymes [BR:
trn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
134319083 (tdg.2)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
134319083 (tdg.2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
134319083
NCBI-ProteinID:
XP_062856146
LinkDB
All DBs
Position
8:32368439..32376211
Genome browser
AA seq
411 aa
AA seq
DB search
MEDKQYDSHMLPVDSFQHWYHSTQEQFQPESIPQYSQLVNAVNYQQEDREYGITDELSVY
KDQYPPQSQLHHQLATQHTALPLTPEKGKKRGRPVKQKSQAKDQVDAEDTVKKTKRTLDR
FNGMSVEEVMARKLPDIITFNLDILIIGINPGLMSAYKGRHYPNPGNHFWKCLFLSGLTE
QQLNYMHDQNLPEKYSIGFTNMVERTTPGSKDLSNKEIREGGKQLLEKLQKYRPRIAAFN
GKGIYETFCKEIFGIKAKNLEFGLQPYKVPDTETLCFLMPSSSPRCAQFPRAQDKVHFYI
KLKELRDQLRGVVPNQEIEETQYTFNLDMAKDDAKKMPIKEEQHDPAYEESSTSGTHQSC
SLYPANKQGVTISEHSSTMESVNSNQWTMQPFAEQIPDIRYPSTNGTTQHY
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagcagtatgattcccatatgcttccagttgattcatttcagcattggtat
cactccacacaggagcagtttcaaccagagtcaatacctcagtacagtcagttggtgaac
gctgttaattatcagcaggaagacagagagtatggcatcacagatgaattatcagtctat
aaggatcaatatccacctcaaagccaacttcatcatcagctggctactcaacacacagct
cttcctttgactcctgagaaaggaaagaaacgtgggcgaccagtgaaacagaaatcacaa
gcgaaggaccaggtggatgctgaagacactgtaaaaaaaaccaaaagaactctggacaga
tttaatggcatgtctgtggaggaggtcatggccaggaaactgccagacatcatcaccttt
aacttagacattttgataattggaatcaaccctggactaatgtctgcctacaagggacga
cattacccaaatccaggaaaccatttttggaagtgcctgttcttatcagggcttacagag
cagcaactgaactacatgcatgatcagaatcttccagaaaaatacagcattgggtttact
aatatggtagagaggactacacctggtagcaaagacctgtcaaataaagagataagagaa
ggtggtaagcaacttctggaaaagctgcagaaatacaggccacgtattgcagcttttaat
ggaaaaggtatttatgaaacattttgtaaagagatttttggaataaaagccaaaaactta
gaatttggactgcagccctacaaagttccagacacagaaacgttgtgcttcttgatgcca
tcctccagtccacgctgtgctcagttccctcgtgctcaggacaaagttcatttttatatt
aagctgaaggagctcagggaccagctgaggggtgtggtgcccaaccaggagattgaggag
acacagtacacattcaatttggacatggccaaagatgatgctaaaaagatgccaatcaag
gaagagcagcatgacccagcctatgaggaaagctctaccagtggaacccaccagtcctgc
agcctctatcctgctaacaaacaaggtgtcacaatttcagaacactcctcaactatggag
tcagtcaattccaaccagtggacaatgcagccattcgcagagcagattccagacattagg
tatcccagcaccaatgggacaacacaacattattaa
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