Trichomycterus rosablanca: 134320094
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Entry
134320094 CDS
T09921
Symbol
otofa
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134320094 (otofa)
Membrane trafficking [BR:
trn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134320094 (otofa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
134320094
NCBI-ProteinID:
XP_062857467
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All DBs
Position
9:complement(34056462..34160805)
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AA seq
1982 aa
AA seq
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MALVVYLKSVSELPGKGDRLAKVSFRGVSFYSRVLENCENEAKFEEAFRWPVASSVDSNE
MLEIQIYNYSKVFTNRLIGIFRMVLQKVVEEGHLEVSDTMTDDNNTSVPTIITIEIRYQP
MNGSTRMWCDGEFLDVLDDHDRLFETESLLSAHSQSSGTSPGRSSYSIPTLKKAGKGVFS
AMKLGKVRSSKDSHKKGDDPAILEAEDLDHKGMQRRIDPDSISLASVTAVTTNVSNKRSK
PDIKIEPLAGRPVDYQISVMVIEARQLVGLNMDPLVCVEIGDEKKYTSMKESTNCPYYTE
YFVFDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGTFKIDIGTIYSQPEHQFYHKWAML
TDPDDITAGCKGYVKCDIVVLAKGDNAKTSRKVSDVDDDDIESHLLLPEGIPAERQWARF
YVKIHRAEGLPKMNASIMANVKKALIGENRDLVDPYVQVLFAGQKGKTSVQKGTYEPTWN
EQIIFTEMFPPLCKRMKVQIRDSDKVNDVAIGTYFIDLRKISNDGDKGFLPTLGPTWVNM
YGSTRQYTLMDEHQDLNEGLGEGVSFRARLLISVAVEILDSSSSDIGVSTEVQVEPFMNV
SEISTGRVEEFFLFGSFLEATMIDRRIGDKLINFEVTIGNYGNQIDGVSKPAQGKKKPRG
DGNDEESELIHNSSDEEPEEDGDLVSVSLTPPMKPVITDSNYFHLPYFEKKPCIYIKSWW
QDQRRRFYNSNIMDKIADKLEEGLNDVQEIIKTEKAYPERRLRGVLEELSTGCSRFVTLA
NKDQNQTGVTKLDRERLKSCLREMESMAQQAKSIRSQVKRNTVRDKLKLTQNFLHRLRFL
ADEPQHSIPDVFIWMISNNKRVAYARIPSRDILYSIVDEEMGKDCGKVKAVFLRLPGKRS
FGPAGWTVQAKMEIYLWLGLSKQRKDFLSGLPSGFEENKIAKSTGLQTAPPISLVYNSMQ
VFQLRAHLYQARSLFAADDSGLSDPFARVFFSTYSQVTEVLSETLCPTWDQLLVFDNVEL
YGEASELRDDPPIIVIEIYDQDSVGKAEFIGRTFAKPLTKMVDEHYGPPRFPPQLEYYQI
YRGNSSAGELLAAFELLQIGPAGVKGLPPLEGPTDGDQGPILPVPLGIRPVLSRYRIEVL
FWGLRDMKRINLTQVDKPRVDIECAGKGVQSSLIANFKKNPNFSTLVKWFEVDLPENELL
HPPLNIRVVDCRAFGRYTLVGTHAVSSLRKFIYTPPDKKANNWASTGDIVVNMHPDPNIK
KMDTVVKLDATSDAVVKVDMNEEKKKKKKKKGEEVEEEEQDERVLDWWSKYFASLETMME
NLKAQEAAMAEAEEREDMEIAAEAAEIRPDESHVKGAKHKEKSKAKKDKDKKKNQGGDGT
EKKDAKPKVDEFLLYPKELEAEFCEFEDWLHTFNLYKGKAGDDDDNSAVDDDRVMGRFKG
SLCIYKLPISEEITKEPGFDSSMGMFQNIPHNDPISVLVRIYVVKATNLHPTDLNGKADP
YLVIKLGKTEIKDKENYISKQLNPVFGKSFDIQVTFPMESMLTVSIFDWDLVGTDDLIGE
TKIDLENRFYSKHRATCGFASTYSLHGYNVWRDPQKPSDILAKLCKEGKVDGPHYGPGGR
VKVADRIILGPTEIEDENGLRKQTDEHVALAALKQWEEIPVVGCKLVPEHVETRILLNPE
KPGIEQGRIELWVDMFPMDVPAPGPALDISPRKPKKYELRVIIWNTDDVILEDDDYFTGE
KSSDIYVRGWLKGQTEDKQDTDVHYRSLTGEGNFNWRFVYPFDYLVAEERIVVSKKESLF
SWDETEYKIPARLILQVWDADHFSSDDFLGALELDLNRFPRGAKSSKLCSLDMIINEQEL
PTISIFKQKRVKGWWPFMAQNENDEPELTGKVEAELHLLTAEEAEKNPVGLGRNEPEPLE
KPNRPDTSLLWFMNPLKSIRYFIWHHYRWLILKTLALLLLLLLLGLFLYSIPGYLVKKLL
GA
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atggctctggtggtttatctgaaatcagtgtcggagcttccaggcaaaggggacagactg
gccaaagtgtcattccgaggtgtgtccttctactcccgtgtgctggagaactgtgagaat
gaagccaagtttgaggaggcttttcggtggccagttgcaagtagtgtggacagtaatgag
atgttggagatccagatatacaactacagcaaagtcttcaccaacaggttgattggaatt
ttccgtatggtcttgcagaaggtggtggaagagggtcatttggaggtgtctgacacgatg
actgatgataacaacacgtcagttccgaccatcatcaccattgagatcaggtatcaacca
atgaatggaagtacacggatgtggtgtgatggagaattccttgatgttctcgatgatcac
gacagattgtttgaaacagagagtttgctctcagcacacagccagagctcaggaacttct
cctggaagatcaagctacagcattcctacactgaaaaaagcaggaaaaggagtgttttca
gccatgaagcttggaaaagtacgcagctccaaagacagccacaagaaaggagatgatcct
gctattttggaggctgaggatcttgatcataaaggcatgcaaaggcgcattgaccctgac
tccatctcactggcttcagtcactgcagtgaccactaatgtctccaataagagatcaaag
cctgatattaagatagagccactagcaggcagacctgtggactaccagattagcgtcatg
gttattgaagcccggcagctggtgggcttgaacatggatcctttggtgtgtgtagagatt
ggagatgagaagaaatatacatcaatgaaagagtcaacaaactgtccgtactacaccgag
tactttgtctttgactttcacgttccaccagatgtcatgtttgacaagatcctgaagctg
tcagtaattcattctaaaaacctactgcgaagtggcacattggttggcacctttaaaata
gacataggaacaatctactcacaaccagagcatcagttttaccacaaatgggccatgctg
actgaccctgatgacatcacagccggctgtaaaggttatgtaaaatgtgacatagttgtg
ctggcaaaaggcgacaatgccaagacatcacgaaaggtcagcgatgttgacgatgatgac
attgaaagtcatcttttgttacctgagggcattccagcagagaggcagtgggctcgcttc
tatgtgaagatccaccgagctgagggcctccctaaaatgaatgccagcatcatggccaat
gtaaagaaggctttaatcggagaaaacagggacctcgtagacccctatgttcaagtgctg
tttgcaggccaaaagggtaaaacctcagttcaaaagggaacgtatgaacctacttggaat
gagcagatcatcttcacagagatgttcccgcccttgtgtaaacgtatgaaagtgcagatc
cgagactcggacaaggtcaatgacgtggccattgggacttatttcatcgaccttcgcaag
atttcaaatgatggagacaaaggatttttacccacactgggtccaacctgggtgaacatg
tatggctccacacggcaatacacactgatggacgagcatcaggaccttaatgaggggctg
ggagagggggtgtccttcagagcccgtctactcattagtgttgccgtggagatcttggac
tcatcctcttcagacataggtgtttccactgaggtccaggtggagccatttatgaatgtt
tcagagatttccacagggagagtagaggagttcttcctgtttggatccttcttagaggcc
actatgattgacaggcgaattggagataaacttattaactttgaagtcacgattggcaac
tatggtaaccaaattgatggagtaagtaagccagcacaaggaaagaaaaagcccagaggg
gacggcaatgacgaagagtctgaactgatccataactccagtgatgaagagccagaggag
gatggtgacctggtgtcagtgtctttgacccctccaatgaaacctgtaattactgacagc
aattactttcacttgccgtattttgaaaaaaagccctgtatatatatcaagagctggtgg
caagatcagcgaagacgcttctacaactcaaacatcatggacaagatcgcagataaactg
gaggagggtctgaatgatgttcaggagattattaagacggagaaggcttatcctgaacgc
agactgagaggagttttggaggagctcagtactggctgcagtcgatttgtcactctggca
aacaaagaccagaatcagacaggcgtaaccaaactagatcgggagcggctgaagtcatgc
ctaagagaaatggaaagcatggctcaacaggccaaatcaattcgttcacaagtaaagagg
aacacggttcgagacaaactcaaactgactcagaatttcctgcacagactccgtttcctg
gctgatgagccacagcacagtattccagacgtgttcatatggatgataagtaacaataaa
cgtgtagcatatgctcgtattccttccagagatattctgtattccattgtagacgaggaa
atgggcaaagactgtggaaaagtcaaagctgtctttctccggttacctggaaagaggagc
ttcggcccggctggttggacagttcaagctaagatggagatctacctgtggttaggtttg
agtaaacagaggaaagattttctgagtggtttgcccagtggctttgaggagaataaaata
gccaaaagcacaggcctgcagactgcaccacccatcagccttgtctataacagtatgcag
gtgttccagctgagggctcacttgtatcaggctcgcagtttgtttgctgctgatgacagt
ggcctgtcggatccttttgccagagtctttttttccacatatagccaggtcacagaggtg
ctgagtgagactttgtgtccaacatgggatcagctgctggtgttcgataacgtggagctt
tatggggaggccagcgagcttcgtgatgaccctccgatcattgtaatagaaatttatgac
caggactcagtgggaaaagctgagtttattggtcgaacttttgccaagcctctcaccaag
atggttgatgagcattacggccccccacgattcccaccccagctggagtactatcagatc
tacagaggaaactcaagtgcaggagagctgcttgctgcctttgaactgctgcagatcgga
cctgcaggagtaaaaggtcttcctcctcttgaagggccaaccgatggtgaccaaggaccc
atactacctgtgcctttgggtattcgacctgtactcagcagataccgtatagaggttcta
ttctggggtctgagggacatgaagagaattaacctgactcaggtggacaaacctcgtgta
gatattgagtgtgcaggaaaaggcgtgcaatcatccctcattgcaaacttcaagaaaaat
ccaaatttcagcactctggtgaagtggtttgaagtggaccttcctgaaaatgaactactt
catcctcctctgaacattcgtgtggtagattgcagagcatttgggcgctacaccttggtg
ggaacacatgcagtgtccagtctccgcaagtttatatacaccccacctgacaagaaggcc
aacaactgggccagcacaggtgacattgtggtcaacatgcatcctgatcccaacataaag
aagatggacactgtggtcaaactggatgctacctccgatgctgttgtaaaggttgatatg
aatgaagaaaaaaagaaaaagaagaaaaagaagggagaggaggttgaggaggaagagcaa
gatgagcgtgtattggactggtggtcaaagtactttgcttcattagaaacaatgatggag
aatctaaaagcccaggaagcagccatggctgaggcagaggagcgagaagatatggagatt
gctgcagaagcagcagagatcagacctgatgaatctcatgtgaaaggcgccaagcacaag
gagaagagcaaagccaaaaaggacaaagacaagaagaagaatcaaggtggtgatgggaca
gagaaaaaagatgccaaacccaaagtggatgagtttctgttgtaccctaaggaacttgag
gctgagttttgtgaatttgaggactggcttcacacttttaatctgtacaaagggaaggct
ggagatgacgatgacaacagtgcagtggatgatgaccgggtcatgggccgattcaaaggg
tcactgtgcatatacaagctacctatttcagaagagatcaccaaagaaccaggattcgat
tccagtatgggcatgtttcaaaatatcccacataatgatcccatcagtgttcttgtgagg
atttatgttgttaaggccactaatcttcatcctaccgacctgaatgggaaagctgatcct
taccttgtaattaaactgggaaagacagagattaaagacaaggagaattacatctctaaa
caacttaaccctgtttttggaaagtcctttgacatacaggtcacatttccaatggagtcg
atgctgacagtatcgatatttgactgggatttagttggcactgatgacctaatcggagag
accaagatcgatctggagaaccgtttctacagcaaacacagagccacttgtggctttgct
tccacctattccctccatggctacaacgtatggcgagatcctcagaagccatctgatatc
cttgccaagttgtgtaaagagggcaaggtggatgggccacattatggaccaggtggaagg
gttaaagttgctgaccgaattatcctggggccaacagaaatcgaggatgaaaacggtctg
aggaagcagactgatgaacatgtggctcttgctgctctgaaacaatgggaggagattcct
gttgttggctgcaaactagttccagaacatgtggagacaaggatccttcttaacccagag
aaaccaggcatagagcaggggcggattgaattgtgggtggacatgtttccaatggatgta
cctgcacccggacccgcactagatatatcaccacgaaaaccaaagaaatatgagctcagg
gtgataatctggaatactgatgatgtgattctggaagacgatgattacttcacgggggaa
aaatccagtgacatttatgtcagaggctggctgaaaggccaaacagaagataagcaggac
acagacgtgcactaccgctctcttactggagaaggaaacttcaactggcgctttgtgtat
cccttcgactatcttgtggctgaggagagaattgtggtctccaagaaagagtccctgttc
tcttgggatgagacggagtacaagatccccgctcgcctcatcctgcaagtgtgggatgct
gatcatttctcctcagatgacttcttaggtgcactcgagctggatttgaatcggtttcct
cgtggagcaaaatcatccaaactgtgctccctggatatgattattaatgaacaagagctg
ccaactatctccatatttaaacagaaacgagtgaagggctggtggccttttatggcacaa
aatgagaatgacgagccagagctcacgggtaaagtggaggcagagcttcatttactaaca
gcagaggaagcagagaaaaatcctgttggcctcggaaggaacgagccagaaccactagag
aaaccaaatcggccagacaccagtctcttgtggttcatgaatcctctgaagtccatacgg
tacttcatttggcaccactaccgctggttgattctgaagacgctggcgctgctgctgcta
ctcctgctcctcggcctctttctttactccatcccaggatacctggttaagaaactgctg
ggggcgtga
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