Trichomycterus rosablanca: 134321196
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Entry
134321196 CDS
T09921
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn00514
Other types of O-glycan biosynthesis
trn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
134321196 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
134321196 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
trn01003
]
134321196 (rfng)
Enzymes [BR:
trn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
134321196 (rfng)
Glycosyltransferases [BR:
trn01003
]
Glycan extension
O-Glycan
134321196 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
134321196
NCBI-ProteinID:
XP_062858874
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All DBs
Position
10:complement(5880504..5907079)
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AA seq
362 aa
AA seq
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MHLSPVGTSRRCFLASLALCALVLLLIPTLQTQPRQGKLPQPLPRGRSSSCEGANNAIGL
SVTGLPTVDAKFQGVQGDAHFSVSGSRSREALELKDIFIAVKTTRKYHKSRLQLLFQTWV
SKAKEQTFIFTDGEDKELRQKAGGNVINTNCSAAHTRQALCCKMSVEYDKFIESQKKWFC
HVDDDNYVILPSLQRLLSSYSHTQDVYLGRPSLDHPIEAAERVKSDGSTSVKFWFATGGA
GFCISRGLALKMSPWASLGNFITTAEKIRLPDDCTIGYIIEALLEVSLTHTHLFHSHLEN
LQRMPADDILNQVTLSYGGFENRRNVVPIAGMFSLAEDPSRFKTVHCLLYPETDWCPRNI
HH
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgcatctctcgccagtcggcacgagtagacgttgctttctcgcctccttggccctttgt
gctctcgtgctgttactgatccccacgctccaaacacaaccgaggcaaggcaagctgccc
caacctctgcctcgaggaagatcctccagctgcgagggtgctaataatgccataggtctg
agtgtcactgggctgcccactgtagatgccaaattccagggggtgcaaggagacgcacat
ttcagcgtatccggctcacggtccagagaagctctggagctaaaagacatttttattgct
gtcaaaaccaccaggaagtatcacaagtcccggctgcagctgcttttccagacctgggtg
tcgaaagccaaagaacagacattcatctttaccgatggcgaagataaggaactgaggcaa
aaagcaggtggcaacgtcatcaacaccaactgctcagctgcgcacacacgtcaggccttg
tgctgcaagatgtctgtggaatatgacaaattcattgaatcacagaagaaatggttctgt
cacgtggacgatgataattacgtcatccttccgagtctgcagcggctgctctcatcctat
tcccacacgcaggacgtgtacctgggacggcccagtctggatcacccaatagaggctgcg
gagagggtcaagagcgatggatcgacatctgtgaagttttggtttgccactggaggcgct
gggttttgcatcagtcgagggctggcgctcaagatgagcccatgggcaagtctgggtaat
tttatcaccaccgcagagaagatccgtctcccggatgactgcacgattggttacatcatc
gaggcactactggaggtttcgctgacacacacccacctcttccactcacacctggaaaac
ctgcagagaatgccagctgacgatatcctaaaccaggttaccctcagctatggtggtttt
gagaacaggaggaatgtggtccccattgctggaatgttttcattggctgaagacccttca
cggtttaagactgttcactgcttactttatcccgagactgactggtgtcctcgcaacatt
catcactga
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