Trichomycterus rosablanca: 134322113
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Entry
134322113 CDS
T09921
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03440
Homologous recombination
trn03460
Fanconi anemia pathway
trn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134322113
09124 Replication and repair
03440 Homologous recombination
134322113
03460 Fanconi anemia pathway
134322113
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
trn01009
]
134322113
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134322113
03036 Chromosome and associated proteins [BR:
trn03036
]
134322113
03400 DNA repair and recombination proteins [BR:
trn03400
]
134322113
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134322113
Protein phosphatases and associated proteins [BR:
trn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134322113
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134322113
Multi subunit type E3
BRCC complex
134322113
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
134322113
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
134322113
BRCA1-A complex
134322113
BRCA1-B complex
134322113
BRCA1-C complex
134322113
BRCA complex
134322113
FA (Fanconi anemia) pathway
Downstream FA components
134322113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
RING_XB3-XBAT31
zf-Nse
zf-RING_5
zf-RING_10
TRAF3_RING
zf-ANAPC11
zf-MIZ
zf-rbx1
Sina_RING
zf-RING_4
DUF6148
Motif
Other DBs
NCBI-GeneID:
134322113
NCBI-ProteinID:
XP_062860053
LinkDB
All DBs
Position
10:36734750..36760504
Genome browser
AA seq
1403 aa
AA seq
DB search
MSVPKSEDVKRGIAVIWENLQCPICLDLMSKPVSTRCDHQFCKFCMMKLLERNKRKDTSC
PVCKTKVTKRSLQESPGFQKLVEGLQTLVQSYEFDTGTNYFTGMPHGRRGASVGTESRDQ
QCSEESTVSEDNVMDKSASLSSSTAAKDAFAKLMDLEDSHPANSQQDCFDPGPGDLPQAS
ENKLADVEDVPPTTGLNGLPAQHQGSPDDVAPKSRKRSSRKSKRRGLEPDRIVDKRKKKS
VEKVSEWLMKISPSSDNVEGDGPLSSDSEAEESVGSTASTEVITKDDKVIISPVREVHGR
PLEEQVFGAVYKRDRKAGMSNRKVFSPEREVVPALHPAASSKNDEQTKRRLSKRNSGRKM
TPADCVKKSSDQETRVQDQEDADKPKESSDVEEGSKLSGGNEEVMETCPLNEEKSDHDAG
TMDESPAFDVPVKRPGRRSKVKMQDAWQDMDHDLAAKETSARKRRLTRSNSEGLKDQVKE
CKYAKSLALVSAGTDMISRNPKLVETEVTIESYPSSPDPKSSDARKTRRSSRLQEFTAEV
QDPLKSKRRRSKLALPKPTEGSENDPSGGLNQPEKIDNGGASNDGQSDKAERIFRTNGCV
FTDDLETIEAVQPTEETPVVPCVSDGNEENALVSVVPDTGDQEGPCTPRSNVVLNTPSSS
VAAIPDSSLPERRQESPSIAVVAPDPLIAAGERRGAEDECDVNDSELDTEQLMKTFKATK
RKSFCLGSPRKSLQNLEEHEHESKDQTEHEDGNSDQSSGLLPLNPGNQPLYERSSKPSQT
CLETNVSSVSLLQSESPPPSKRSQQDYFLKASGTSESSALSPNKVARSTQGSQLLPNEPE
GSCLLFSTSITQDCSNKSPESLKGLLRITQVLKEDQRNGSIPKIDSVPNKILDTPVGNSG
VHSNNFESSVTPDGLVPNDVYQIVEPVADRGSDRVEDAGGGEILSQPCLPRKRRAQRLES
SDSESSLENDSLPSMAQIFKSNRLSARPREGPPSESNEDGPQVEGQNPGSEPLSRQLGQC
VEPKNQESLENVESATKHDQDLPNPGCRDEWITSSQGSVDLFGTPEECEEAVDGVCVHAG
LSIDSQYSSEIINTQQKEEMQQELRRLERMMALVSEALQKKESGETGDKNETEDSDKHPA
GKQQQQCRTTSPRSCQSEVSPQNLEVKDHEVAPEGEKTTDTRAETTLVNECGSDSAGKME
LVASGLSPRELGMVRKFAKKMQGSTSRHVTPSSTHIIIKTDAHLVCERTLKYFQGIAGRK
WMVSFLWISECFKQGKVLDESLFEVCGDVVNGHDHNGPRRARTTPDKDLLMKGYEICFQG
SFTDMTSDQMEVLVEMCGATVMKDPLMFSKQANPYQLVVVQPGPDDSQSYYTALQKKARV
VTRSWLLDSIATYTLQNPDDYKP
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttccaaagtctgaggacgtcaagaggggaatcgctgtgatttgggagaacttg
cagtgtccaatatgtttggacttgatgagcaaaccagtgtcgacccggtgcgaccatcag
ttttgcaaattctgtatgatgaagctgctggagaggaacaaaagaaaggatacgagctgc
ccggtgtgcaaaacaaaagtcaccaagaggagtctgcaggaaagtccaggcttccagaaa
ctggtagaaggattacagactttagtccagtcctatgaatttgacacaggcacaaactat
tttacagggatgccacatgggagacgaggagccagtgttgggaccgagtcgagagatcag
cagtgcagtgaggagagtaccgtctctgaggacaacgtgatggacaaatcagcgtccctg
tcctcttcgacagcagctaaggatgctttcgcaaaactgatggatcttgaggattctcat
cctgctaattcacaacaggactgctttgatcccggtcccggtgatttaccacaagcgtct
gaaaacaaactggcagacgttgaagatgttccaccaactacagggctcaacggtttgcca
gcgcagcatcaggggagtccggatgatgtggcaccgaagtctagaaaacgttcaagcaga
aaatccaaaaggcgtggtctggagccggacagaattgtggacaagagaaagaaaaagagt
gtggagaaggtgtcggagtggttgatgaagatctcaccctcttcagacaacgtagaagga
gatggtccattatcctctgatagtgaggctgaggagagcgtaggctcaacggcgtcaacc
gaagttataactaaagatgataaagtaataatcagtcctgtaagggaggtgcatggtcga
cctttggaggagcaagtgtttggggcggtgtacaaacgggatcggaaagctggcatgtct
aacaggaaagtgttttctcccgagagagaggttgttcctgcgcttcatcctgctgcttca
tcgaagaacgatgaacagaccaagagacgcctgtctaagagaaactctgggcgtaaaatg
actcctgctgattgtgtcaagaagtcatctgatcaagaaacgagagtgcaagatcaagag
gacgctgacaaacccaaggaatcttctgacgtcgaagaaggaagcaagttgtcaggagga
aatgaggaggtgatggaaacttgtccattaaatgaggaaaaatcagaccatgacgctgga
actatggacgaaagtcctgcgtttgatgttcctgtgaagagaccagggcggagatcgaaa
gtgaagatgcaggatgcttggcaagacatggaccacgacttggcagcaaaagaaaccagt
gctcgcaagaggcggctcactaggagcaactccgaaggtttgaaagatcaagtgaaagaa
tgcaagtacgccaagtctcttgcgctcgtcagtgctgggactgatatgatcagcaggaat
cccaaactggtcgagactgaggtcactatcgagagttaccctagtagcccggacccgaag
tcctcagatgcaaggaagaccagaagaagctcgaggcttcaggagttcactgcagaagtt
caagaccctctaaagtctaaaagaaggcgatctaaactcgcattgccgaagcctacggaa
gggtctgagaacgatccatcagggggtctgaatcaacctgaaaagatcgataatggaggc
gcaagtaacgatggacaaagtgacaaagcagaacggatcttcagaacaaacggctgcgtc
ttcactgatgacctagaaacaattgaggccgtgcagccaactgaggagacaccagtcgtt
ccctgtgtatcagatggaaatgaagaaaacgcactcgtttctgtcgtcccagatacaggg
gatcaagaaggaccatgtacccctcgctcaaatgtggttctcaacacgccaagttcctcg
gtggctgcaataccagactcatccttaccagagagacgtcaggaatctccatccatagcc
gtcgtcgctcctgatccgttaatcgctgctggcgagcgcagaggcgctgaggacgaatgt
gacgtcaacgatagcgaactcgatacggagcaactcatgaagaccttcaaagccaccaag
aggaagtccttctgcttaggcagcccgaggaaatctctccagaatttggaagaacatgag
catgaaagtaaagatcagacagagcatgaagatggaaattctgaccaaagttctggactc
ttacctttaaaccctggtaatcagcctctatatgagagatcatcaaagccttctcagacc
tgtttggaaacgaacgtctcaagtgtcagtctgcttcagtctgaatcgcctcctccgtct
aaaagaagtcaacaggattattttctaaaagcttctggcaccagtgaaagttctgccctg
agtcccaacaaggttgcgaggtctactcaaggttcccagcttcttccgaatgaacctgaa
ggttcctgcctgcttttctctaccagcataactcaagactgtagcaacaagtcccctgaa
tctttaaaaggtctattgaggataacccaagtcctaaaggaagaccagaggaatggatcc
atacctaaaatcgactcggttcccaacaaaattctagacaccccagtcggaaactctggt
gttcactctaataattttgaatcctcggtcaccccggatggccttgtaccaaacgacgta
taccagatagtcgaacccgtagccgaccgaggttcggatagggttgaggatgctggtgga
ggagagattctatctcaaccctgtttgccgaggaagaggagagcccagaggctggagtct
tcagattctgaatccagccttgagaatgacagcctgccatcgatggcgcagatattcaaa
tccaaccgcttgtccgcacgacctagagaaggtccaccaagcgagtcgaatgaagatgga
ccgcaagtggaaggtcagaatccaggttcagagcctttgagtcgccaattgggccaatgt
gtggaacctaagaaccaggaatcccttgaaaacgttgagtccgctactaaacatgatcag
gacttacctaaccctggctgcagggatgaatggattacgtctagccagggatctgtggac
ctgttcggtacaccagaagaatgtgaagaagcagtggacggagtttgtgtccatgccgga
ctctccatagattctcaatactccagtgagatcataaacacacagcaaaaggaggagatg
cagcaggagctgcggaggctggagagaatgatggctttggtgtccgaggctctgcagaag
aaggaaagtggcgagacgggggacaaaaatgagactgaggacagcgacaagcacccagca
ggaaagcagcagcagcagtgcagaacaacaagcccgagatcctgccaaagcgaagtgtcg
cctcagaacctggaggttaaagatcacgaagtcgccccggagggagaaaagacgacagat
acacgagcggaaacgacactggtgaacgaatgtggatcggatagcgccggcaaaatggag
ctggtggcatctgggctgagccccagggaactggggatggtgagaaagttcgccaaaaag
atgcagggcagcacgagccgacatgtgactcccagctcaactcatatcatcataaaaaca
gatgcacatttggtgtgtgagagaacgctgaagtacttccagggcatcgctggcaggaaa
tggatggtgagcttcctgtggatctcggagtgcttcaagcaaggcaaagttctagacgag
tctctgtttgaagtttgtggcgacgttgtaaatggacacgaccacaatggacccagaaga
gcccgaaccacgccagataaagatctgctgatgaaaggatatgagatctgcttccagggt
tccttcactgatatgacttcagatcagatggaggtcttggttgaaatgtgtggtgcgacg
gtcatgaaagatccgctcatgttctctaaacaggctaatccctatcagctggtggtggtt
cagcccggtcctgatgattctcagtcctattacacagctctgcagaagaaggcccgagtg
gtgacacggagctggttgctggattcgatagcgacctacacgctccagaatccagacgat
tataaaccttga
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integrated database retrieval system
