Trichomycterus rosablanca: 134322839
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Entry
134322839 CDS
T09921
Symbol
nr1h4
Name
(RefSeq) bile acid receptor
KO
K08537
farnesoid X receptor
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134322839 (nr1h4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
trn03310
]
134322839 (nr1h4)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134322839 (nr1h4)
Nuclear receptors [BR:
trn03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
134322839 (nr1h4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Ribophorin_II_3rd
Motif
Other DBs
NCBI-GeneID:
134322839
NCBI-ProteinID:
XP_062860268
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Position
11:complement(32720618..32740304)
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AA seq
485 aa
AA seq
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MNEWVGSDVNVVGPLQIPPNDGFPLPDGLHFFDILAEQSGPLLQDQEVLPFNSYPSMQYS
TVEQSMSPPSYYSNQHYYPQYNVEEWCSPSTMLELRKGPLEGGYETEIKEPSPVIPTVYK
RPRHAPNLGRFKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSGGNCE
MDMYMRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKNPKSSQEDDTEYDTEVGDSG
DAKQVTSTTKTLKEKLELNSEQQTLLTYILDAYNKHRIPPDMAKKLLQEQFSKEENFLLL
TEMATSHVQVLVEFTKNIPGFQSLDHEDQIALLKGSAVEAMFLRSAQPFTKKLPHGHTEV
LEDRIRKSGISEEFITPMFNFYKSIGELLMMQEEHALLTAITILSPDRPYVKDQQAVERL
QEAMLEVLWKFCKLNHPQEPQRFARLLGRLTELRTLHHYHAEMLESWRMSDHKFNPLLCE
IWDVQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtgggttggatctgatgtcaatgtggtgggacctctccagatcccacccaac
gatgggtttcctctgccagatggattgcatttctttgatattttggcagagcagagtggc
cctttgctacaggaccaggaggtcttacccttcaacagctatcccagcatgcagtactcc
acagtggagcaatccatgtccccaccatcctattactccaatcaacactattacccacag
tacaatgtggaggaatggtgctcgccgtctacaatgttggaactgaggaaaggtccgctg
gaagggggttatgagacagagataaaggaaccatctcctgtcattcccactgtttataag
agacccagacatgctcccaatttgggccggttcaaaggggaagaactgtgtgtggtgtgt
ggggacaaagcttcagggtaccattataatgctctcacgtgtgaaggatgtaaagggttt
ttcagaagaagtataacaaagaatgctgtgtataagtgcaagagtggtgggaactgtgag
atggatatgtacatgcgcagaaagtgtcaggaatgtcgactccggaagtgcaaagagatg
ggcatgcttgcagaatgtttgctaactgagattcagtgcaagtcaaaaagactgagaaaa
aatccaaagtcctcacaggaggatgacacggaatatgatacagaagtgggagacagtggg
gatgctaaacaagttacatccacaacaaaaacattaaaagaaaagttggaattaaactct
gagcaacaaactttactaacttatatccttgatgcatacaacaaacatcgcatccctcca
gacatggccaagaaactgctgcaggagcagttcagtaaagaggagaacttcctcctactg
actgagatggcaacaagccatgtccaggttctggttgagttcacaaaaaacattccaggt
ttccagtctctggaccatgaagatcagatagctttacttaagggttcggcagtggaggcc
atgttcctgcgctctgctcagcccttcaccaagaaacttccacatggacacacagaggtg
ctggaggacagaataagaaagagtggaatatctgaagagttcatcacccctatgttcaac
ttctataagagtatcggggagctactgatgatgcaggaggaacatgctctcctcactgcc
attaccattctttcaccagaccgaccctatgttaaagaccagcaagctgtggagcgactc
caggaagcaatgctggaggtgctgtggaagttctgcaagctgaatcaccctcaggagcca
cagcgttttgcccggctgttgggtcggctgaccgagctgcgcactctacaccactatcat
gctgaaatgctggagtcatggcgcatgagcgaccacaagttcaacccgctgctctgtgag
atttgggatgtacagtaa
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