Trichomycterus rosablanca: 134328645
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Entry
134328645 CDS
T09921
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
134328645 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trn03400
]
134328645 (nthl1)
Enzymes [BR:
trn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
134328645 (nthl1)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
134328645 (nthl1)
Prokaryotic type
134328645 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
134328645
NCBI-ProteinID:
XP_062865865
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All DBs
Position
15:complement(31849747..31854171)
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AA seq
367 aa
AA seq
DB search
MFSSFVRVVCASVMKRTSSSYFRSAAGLGTVQNSGGIGGLRSRMVENNTIKEEPDDGHTS
TVQESQYGQSEASGRGKRRHLKVEYEAEGAAAKDERWEPPDWRSQLTLVREMRSGRDAPV
DQMGAEKCHDPDAPPEVRRYQVLVSLMLSSQTKDQVTAAAVRRLRGRGLSVASVLEMDED
TLGRLIYPVGFWRRKARYIKQATEMIQREFGGDVPDTVEGLVRLPGVGPKMAHLAMTIAW
SRVSGIGVDTHVHRISNRLGWTRQATKNPEETRRALERWLPRDLWAEINWLLVGFGQQVC
LPVGPLCSLCLNRRSCPSAHGPAPDGRPEPRTAKREVKEEPAAVPVATSRSRRRTDTSKT
QKKLRPT
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtttagctcgtttgttcgtgttgtttgcgcctcagttatgaagagaacgagttcttcg
tatttcagaagtgctgcaggtctggggactgtccagaattctggaggaatcggggggtta
agatccaggatggtggagaacaacacaatcaaagaggaacctgatgatggacataccagt
acagtacaggagtcccagtatggacagtctgaagcttctgggcgcggaaagcggcgccac
ctcaaggtggagtacgaagccgagggcgctgcggcgaaggacgagcgctgggagccgccc
gattggaggagtcagctgaccctcgtcagggagatgcggagcggccgggacgctccggtg
gaccagatgggggcggagaaatgccacgacccggacgctccacccgaggtgaggcgctac
caggtgctggtgtcgctgatgctgtccagtcagacgaaggaccaggtgacggcggcggcc
gtgcggaggctgcgtgggcggggcctaagcgtggcgtccgttctggagatggacgaggac
acgctgggccggctgatctaccccgtggggttctggaggaggaaagcgaggtacataaag
caggcgaccgagatgatccagcgcgagttcggaggggacgtccccgacacggtggagggt
ctggttcgtctccccggcgtgggacccaagatggcacatctggccatgaccatcgcctgg
agtcgggtgtccgggatcggtgtggacactcacgtccatcgtatctccaacaggctgggc
tggacccgccaggccaccaaaaacccggaggagaccagacgagctctggagcggtggcta
ccgagagacctgtgggccgagatcaactggctgctcgtgggtttcgggcagcaggtgtgt
ttacccgtcggccccctgtgctccttgtgtctaaaccgccgctcctgcccctctgctcac
ggaccggcacccgacggaagacccgaaccccgtacggctaaacgggaggtgaaggaggaa
ccggccgccgtcccggtcgctacatctcggtccaggagaagaacggacacgagcaaaacc
caaaaaaagctccgccccacctaa
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