Trichomycterus rosablanca: 134330402
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Entry
134330402 CDS
T09921
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
trn
Trichomycterus rosablanca
Pathway
trn04110
Cell cycle
trn04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134330402 (rb1)
04218 Cellular senescence
134330402 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
trn01009
]
134330402 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134330402 (rb1)
Protein phosphatases and associated proteins [BR:
trn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134330402 (rb1)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
134330402 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
134330402
NCBI-ProteinID:
XP_062867590
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All DBs
Position
16:26811571..26866796
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AA seq
719 aa
AA seq
DB search
MFLLVKGSVLQMEDDLVIAFQLLLCVLEFYIKRCPSSLLQPLYTVGDAAQSPPTRTSRRN
RSKTRPPDMDAQLLETLCKESDCSVDEVKNVYQSSFSAFVVSMGLSGSQEHPEVETLSKK
YEELYNKNKDFDARLFLVDDETLSPNKPEVVKVDMTPRKNFSGEDCAPLPPQTPIRAAMN
SIQQLRGELTSVSDRPSANLIVYFKNCTVDPSEEITKRVEQLGQIFSQKFAQAVGQRCEG
LGKKRFTLGVQLYYKVMESMLKSEEKRLSVQNFSKLLNDAKFHTSLLACALEVIMATYVG
GSLNSGVSDSPEMNLCFPWILKVFQLHAFDFYKVIESFIKAEPSLKHEMIEHLGRCEQQI
MKSLAWKTGSPLFELLSQAHEEGSGEQAEPPAMLNQPLQHNHTAADLYLSPLRLSHRVQI
AEAEIPTVSPAPPSAPGTRQLRSNSLSLFYKKLYRMAYLRLQKLFSALLTSHPELEAIIW
TLLQHTLQNEYELMRDRHLDQLMMSAMYAICKVKNVDLRFKSIVTAYKELPNTNQETFKS
VLIREGQYDSIIAFYNQVFMQKLKTNILQYASPRPPPLSPIPHIPRSPYKYPSSPLRVPG
GNVYISPLKSSRLTPGAMTPRSRILVSIGESFGTPDRFQKINQMVSSADWPPKRSLEGPS
NPKPLKRLRFDVDGQDEADGSKSSGESTLIQKLAEMNSARNRMQEQKLKEEAERDDPEP
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcctggtaaaagggagtgttttgcagatggaggatgacctggtgatcgccttc
cagttactgttgtgcgtgctggagttctacatcaagcgctgtccatcgtctctcctccag
cctctgtacaccgtcggcgatgccgcccagagcccgccgactcgcacttcgagacgcaac
cgatccaagacccggccacctgacatggacgcgcagttactggagacgctgtgtaaagag
agcgactgcagcgtggacgaggtgaaaaatgtttaccaaagcagtttctctgccttcgtt
gtctcgatgggcttgtcgggatctcaggagcatccagaggtggaaactctatccaaaaaa
tacgaagaactttacaataaaaacaaggactttgatgctcggctgtttttagttgatgat
gagactctcagccccaataaaccagaagtagtaaaggtggacatgactcccagaaagaat
ttctctggagaggattgtgctccccttccaccacagaccccaatcagagctgctatgaat
tcaattcagcaattgaggggcgagcttacctcagtcagtgaccgaccgtctgccaacctt
attgtttacttcaagaactgtactgtggacccatcagaagaaatcactaagcgtgttgag
cagcttggtcagatattcagccagaagtttgctcaggctgttggtcagcgctgtgaaggc
ttgggcaaaaagagattcacactcggtgtccagctttactacaaagtcatggagtctatg
ctgaaatcggaagagaaaagactctccgtgcaaaatttcagtaaacttctcaatgatgct
aagttccatacctcactgcttgcttgtgcgctggaggtcatcatggcaacttatgttggt
ggttctctgaacagtggggttagtgactctcctgagatgaacctgtgcttcccctggatc
ctgaaagttttccagcttcatgcgtttgatttttacaaagtgatcgagagcttcatcaag
gccgagccctccctgaaacacgagatgatcgaacacctgggccgctgtgagcaacagatc
atgaagagcctcgcgtggaaaacgggttctccgttgtttgagcttctgagtcaggcgcat
gaggaggggtccggggagcaggcagagcccccggccatgttaaaccagccgctacagcac
aaccacactgctgccgatctatacctctcccccctcaggctgagccatcgcgtccagata
gccgaggcagagatcccaaccgtttcgccggccccgccctcggcccccggcaccagacag
ctccgctccaactcgctcagcctcttctacaagaagttgtacagaatggcctacctgcgg
ctacagaagcttttctctgcactgctgacctctcaccctgagctggaggccatcatctgg
actctgctgcagcacacgctacagaacgagtatgagctgatgagggaccgacacctcgac
cagctcatgatgtctgccatgtatgccatatgcaaagtgaagaacgtggatctgcgcttt
aagtcgatcgttacggcttacaaagagcttcccaacacaaaccaggagaccttcaagagt
gtgctgatcagggagggtcagtatgattccattatcgccttctacaatcaggtgttcatg
cagaaactgaagaccaacatcctgcagtacgcctcgcctcggccaccccctctgtctcct
ataccccatatcccccggagtccttacaaataccccagctcgcctctgcgggtgcctggt
gggaacgtctacatctctcctttgaaaagcagtcgcctgactccaggtgccatgactccc
agatccaggattctcgtatcaatcggagagtcgtttgggacaccggacaggttccagaaa
atcaatcagatggttagtagcgcggattggccgccgaagaggagtctggagggaccgtcc
aaccccaaacccttgaagagattacgcttcgatgtggacggacaggatgaagcggatgga
agtaaatccagtggcgagtcgacgctgatccagaagctggcagaaatgaattccgctcgc
aaccgcatgcaggaacagaaactaaaggaggaggctgaacgagacgacccggagccctga
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