Trichomycterus rosablanca: 134334469
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Entry
134334469 CDS
T09921
Symbol
otx5
Name
(RefSeq) orthodenticle homolog 5 isoform X1
KO
K09337
cone-rod homeobox protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134334469 (otx5)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
134334469 (otx5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
TF_Otx
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
134334469
NCBI-ProteinID:
XP_062872853
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Position
20:27858704..27862745
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AA seq
299 aa
AA seq
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MMSYIKQPHYAVNGLTLSGPGMDLLHTAVGYQKNCPDYTPRKQRRERTTFTRAQLDVLES
LFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQPKPRPTKKKSSP
AQETTSDPATANSNINAPYSPVALQPPIPPPAVTPSSSGSNANASVSIWSPASVSPLADP
LCVSSKTAYAMTYAQTPAYAPAYATTSSYFSGLDCSSYLSPMHAPLSATGGGALSPIGSS
SSMTLGQSQAAQGYGAASLGFSTIDCLDYNKDPMAWKLNFGAADCLDYKDQNSWKFQVL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacattaaacagccccattacgcagtgaacgggttaacactgtccgggccg
ggcatggacctcctccacaccgccgtgggataccaaaaaaactgtccagactacacgccc
cggaagcagcggcgcgagaggaccacgtttacccgcgcgcagctggatgtgctggagtcg
ctgttcgctaagacgcgctaccccgacatcttcatgcgcgaggaggtggcgctaaagatc
aacctgcccgagtccagggtccaggtctggtttaaaaaccgtcgtgctaagtgtcgccag
cagcagcagcagagcagcggccagcccaaaccccgccctaccaaaaagaaatcatctccc
gcccaagagacgacctctgaccccgctacggctaactctaacatcaatgcaccgtacagc
cctgtagctctacaaccaccgatcccaccgccggccgtcacgccgagctcgagcgggtcc
aacgccaacgccagcgtgtccatctggagccccgcctccgtctcgccgttggccgatccg
ctctgcgtgtcgagtaaaaccgcttacgcgatgacgtacgcgcagacgcccgcctacgct
ccggcctacgccaccacctcgtcttacttcagcggcctcgactgcagctcgtacctgtct
cccatgcacgcgccgctctcagccaccggagggggcgctctcagccccatcggctcctcg
tcctccatgactctcgggcagtctcaggccgcacagggttacggtgccgcgtccctcggt
ttcagcaccatcgactgtctggactataataaagacccgatggcgtggaagcttaacttc
ggagcggccgactgcctggactacaaggaccagaattcctggaagttccaggtgttatag
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