KEGG   Trichomycterus rosablanca: 134334626
Entry
134334626         CDS       T09921                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
trn  Trichomycterus rosablanca
Pathway
trn03420  Nucleotide excision repair
trn04110  Cell cycle
trn04114  Oocyte meiosis
trn04120  Ubiquitin mediated proteolysis
trn04141  Protein processing in endoplasmic reticulum
trn04310  Wnt signaling pathway
trn04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:trn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    134334626 (rbx1)
   04120 Ubiquitin mediated proteolysis
    134334626 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    134334626 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    134334626 (rbx1)
   04350 TGF-beta signaling pathway
    134334626 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    134334626 (rbx1)
   04114 Oocyte meiosis
    134334626 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:trn04121]
    134334626 (rbx1)
   03400 DNA repair and recombination proteins [BR:trn03400]
    134334626 (rbx1)
Enzymes [BR:trn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     134334626 (rbx1)
Ubiquitin system [BR:trn04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   134334626 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     134334626 (rbx1)
   Cul2 complex
     134334626 (rbx1)
   Cul3 complex
     134334626 (rbx1)
   Cul4 complex
     134334626 (rbx1)
   Cul7 complex
     134334626 (rbx1)
   Cul8 complex
     134334626 (rbx1)
   Cul9 complex
     134334626 (rbx1)
DNA repair and recombination proteins [BR:trn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      134334626 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      134334626 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 134334626
NCBI-ProteinID: XP_062873107
LinkDB
Position
2:complement(48862154..48870315)
AA seq 108 aa
MAAAMDVDSPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggctgcgatggatgttgatagcccgagcggaacaaacagcggggcgagtaagaag
cgcttcgaagtgaaaaagtggaatgcagtggctctgtgggcctgggacatcgtggtggat
aactgtgccatctgcagaaaccacattatggatctctgtatagagtgccaggccaaccag
gcttctgctacatcggaggaatgcacagtggcttggggagtgtgtaatcatgcctttcat
ttccactgcatctctcgctggctgaagacgaggcaggtgtgtcccctggataacagagag
tgggagttccaaaagtacggtcactga

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