Trichomycterus rosablanca: 134335067
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Entry
134335067 CDS
T09921
Name
(RefSeq) H-2 class I histocompatibility antigen, Q9 alpha chain-like
KO
K06751
MHC class I antigen
Organism
trn
Trichomycterus rosablanca
Pathway
trn04144
Endocytosis
trn04145
Phagosome
trn04218
Cellular senescence
trn04514
Cell adhesion molecules
trn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134335067
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134335067
04145 Phagosome
134335067
09143 Cell growth and death
04218 Cellular senescence
134335067
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134335067
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134335067
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
trn00537
]
134335067
Exosome [BR:
trn04147
]
Exosomal proteins
Proteins found in most exosomes
134335067
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
trn00537
]
Antigens
134335067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
C2-set_3
C2-set_2
Psg1
I-set
Ig_3
PepSY_TM
MHC_I_3
MHC_II_beta
Rv3627c_N
Podoplanin
DUF202
Motif
Other DBs
NCBI-GeneID:
134335067
NCBI-ProteinID:
XP_062873520
LinkDB
All DBs
Position
21:22415569..22434314
Genome browser
AA seq
350 aa
AA seq
DB search
MDAFIMRVLLLLSCGFAAVSAGTHSLQYFYTGARGINFPEFTIVGMMDGGQFVYYDSNMK
KMIPKTEWIDKNEGSDYWNTQTQVLQGSEEVFKVDVTTLMQRFNQTEGVHTWQWMYGCER
DDDGTNRGYMQYGYDGEDFISLDKNTLTWTAANAKAVITKHKWEPTGEAKRFKNYLENTC
IEWLRKYVSYGRETLERKDRPEASVFHKHFPRPELVCHATGFFPSGLVMSWQKNGQEMHE
DVAVTMTAPNQDGTFQKRAALRVSPEELKEHEYTCVVQHSSLEKDLVLKASEARNQPGGG
SLGIIVGAVVAVLALVALIAGVVIWKKKNSGFKPVPAKPNSSSDDSSTHS
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgtttatcatgagagttctgcttctactcagctgtgggtttgctgctgtttca
gcaggaactcactcactacagtacttctacactggagccagaggaattaatttcccagaa
ttcactattgttggtatgatggatggaggccagtttgtgtactacgacagcaacatgaag
aagatgatcccaaaaacagagtggatagacaagaatgagggttcagattactggaacaca
cagactcaggttctacagggttctgaagaggtcttcaaagttgatgtcactacactgatg
cagcgcttcaaccagactgaaggagttcacacgtggcagtggatgtacggctgtgagcgt
gatgatgatggaactaatcgaggatacatgcagtacggttatgatggagaagatttcatc
agtctggataaaaacactctcacctggactgcagctaacgctaaagctgtaattaccaaa
cacaagtgggaacctacaggtgaagctaaacgcttcaagaactacctggagaacacctgt
atcgagtggttgaggaagtacgtgtcgtacggcagagagactctggagaggaaagatcgt
cctgaagcctccgtgttccacaagcacttccctcgaccagagctggtgtgtcacgctact
ggtttcttccccagtggactggtgatgtcctggcagaagaacggacaggaaatgcacgag
gacgtggcggtcacaatgactgcaccaaaccaggatggaaccttccagaagagagccgct
ctgagagtctcacctgaggagctgaaggaacatgaatacacctgtgtggttcagcacagc
agcctggagaaggacttagtgcttaaggccagtgaagcacgaaaccagcctggtggagga
tctcttggtatcatcgttggtgcagtcgtggctgttcttgctctggttgctctgattgct
ggagttgtgatctggaagaagaagaattctggcttcaaaccagttccagctaaacccaac
agctcttctgacgactcctccacccactcctaa
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