Trichomycterus rosablanca: 134335190 Help Entry 134335190         CDS       T09921                                  Symbol traf2a Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism trn  Trichomycterus rosablanca Pathway trn04010   MAPK signaling pathway trn04137   Mitophagy - animal trn04141   Protein processing in endoplasmic reticulum trn04210   Apoptosis trn04217   Necroptosis trn04621   NOD-like receptor signaling pathway trn04622   RIG-I-like receptor signaling pathway trn04920   Adipocytokine signaling pathway trn05132   Salmonella infection trn05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:trn00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     134335190 (traf2a)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     134335190 (traf2a)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     134335190 (traf2a)   09143 Cell growth and death    04210 Apoptosis     134335190 (traf2a)    04217 Necroptosis     134335190 (traf2a)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     134335190 (traf2a)    04622 RIG-I-like receptor signaling pathway     134335190 (traf2a)   09152 Endocrine system    04920 Adipocytokine signaling pathway     134335190 (traf2a)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     134335190 (traf2a)   09171 Infectious disease: bacterial    05132 Salmonella infection     134335190 (traf2a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:trn03019]     134335190 (traf2a)    04121 Ubiquitin system [BR:trn04121]     134335190 (traf2a) Enzymes [BR:trn01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      134335190 (traf2a) Messenger RNA biogenesis [BR:trn03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      134335190 (traf2a) Ubiquitin system [BR:trn04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     134335190 (traf2a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_2 zf-RING_5 Sina_ZnF zf-RING_6 zf-C3HC4_4 zf-ACC MATH Motif Other DBs NCBI-GeneID:  134335190 NCBI-ProteinID:  XP_062873730 LinkDB All DBs Position 21:complement(5827162..5837207) Genome browser AA seq 581 aa AA seqDB search MAAQDPSPPSSLEGNKPGFPRKILANKLEEKHLCNICQKILRRPCQAQCGHRFCSYCFNK TVSAGPQKCSACIKEDIFEESTSILKQGCAFPDNAAKREVEALEAVCINEGCSWTGTIKE YEATHEVQCDFMIIPCPSCKELLRANELERHNERECPERTLNCKYCKEPFHFKNIKAHDE ICPKYPMICEGCAKKKIPREKYVDHIKLCTKFRTPCRFHVVGCDMSVEKEKIHEHERACS YEHLNLLLHFIMGIKVSVESLQPQGLELASHKLEGLQQSLRELEFKLGQLNAGAPVQGPC VPCTPMPAPPLPVLPSPTLATSFMPLPSTVGAALELQLHSEKAKVAELSRRCQELEVKAS TFENIVCVLNREMERSATTMEAYNRQHRLDQDKIEILNNKVRQLERTVGLRDLSIVEMEG KMREMSAATYDGVFVWKISDFAKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDG TGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPV SDMNIASGCPLFCPLSKLDSKNSYIRDDTIFIKAIVDLTGL NT seq 1746 nt NT seq  +upstreamnt  +downstreamnt atggctgctcaagatccttctccaccgtcttcactggaaggcaacaagcccggctttccg agaaaaatcctggccaacaagcttgaggaaaagcatctgtgtaacatctgccagaagatt ttgcggaggccgtgtcaggcgcagtgcggacaccgcttttgttcctactgcttcaacaaa acagtgagtgctggtccacaaaaatgcagtgcctgtataaaagaagatatctttgaggag tcgacatccattttaaaacagggctgcgcttttcctgacaatgctgctaaaagagaagtt gaagcccttgaagctgtctgtataaatgagggttgcagctggacgggcacaatcaaagaa tatgaggccacccatgaagtacagtgtgattttatgatcatcccatgtccctcctgcaaa gagctcttaagggctaatgaacttgagcgtcacaacgagagggaatgtccagagaggact ctcaactgcaaatactgcaaggaaccttttcatttcaaaaacataaaggctcatgacgag atttgtccgaaatacccgatgatttgtgagggctgtgcgaagaaaaagattccccgagag aagtatgtggaccacattaagctgtgtaccaaatttcgaacgccgtgtagatttcacgtg gtcggctgcgacatgtctgtggaaaaggagaagatccacgagcatgagcgggcgtgttca tacgagcacctaaacctgctgctccacttcatcatgggcatcaaggtaagcgtggagagt ttgcagccgcagggattagaactggccagccacaagctcgaggggctgcagcaatctctc agagagctggagttcaagctgggccagctgaacgctggggctcccgtgcaggggccctgc gtgccctgcacacccatgcccgctcctccacttcccgtactgccctcgcccaccctcgcc acctcgttcatgccgctgcccagcacagtgggtgccgccctcgagctgcagctgcacagc gagaaggccaaagtggccgagctgagccggcgctgtcaggagctcgaggttaaggccagc accttcgagaacattgtgtgtgtgctgaatcgggagatggagcgctctgccactaccatg gaggcctacaaccggcagcaccgactggaccaggacaagattgagatcctgaacaacaag gttcgacagttagagaggacggttgggctgagggatctctctatcgtggagatggagggc aagatgagagaaatgtcagccgccacctacgatggtgtgtttgtgtggaagatctctgac tttgccaagaagaggcaggatgcagtggcaggacgggcaccagccatgttctcaccggca ttttatacgagcaaatatggctacaaaatgtgtttgcgaatctacctgaacggcgacggg acggggcgtggcactcacttgtctttgttcttcgtggtgatgaggggacacagtgatgcc ttgcttaagtggccttttaaccagaaggtcacccttatgttgctggaccaaaacaacaga gagcacatcatagacgcattcaggcccgacatctcgtcctcatcgttccagaggccggtc agtgacatgaacattgccagtggctgcccactcttctgccctctctccaagctggactcc aagaactcctacatccgagacgacaccatcttcatcaaggccatcgtcgacctcaccggc ctttag

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