Triplophysa rosa: 130547436
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Entry
130547436 CDS
T09216
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X1
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
tros
Triplophysa rosa
Pathway
tros04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130547436 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
tros04050
]
130547436 (tnfrsf11a)
04090 CD molecules [BR:
tros04090
]
130547436 (tnfrsf11a)
Cytokine receptors [BR:
tros04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
130547436 (tnfrsf11a)
CD molecules [BR:
tros04090
]
Proteins
130547436 (tnfrsf11a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
RANK_CRD_2
Motif
Other DBs
NCBI-GeneID:
130547436
NCBI-ProteinID:
XP_057179385
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Position
LG23:complement(12941491..12952933)
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AA seq
587 aa
AA seq
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MRLDFSASWIFQGWITHLVLALCTQTGLAKTCRHPEYEHNGVCCSKCEPGKYVFDHCTGT
SGTKCRGCGRDEYQPDWSSDMKCIPQKFCDEGKGFNRTRPHNPIAPEPCRCKQGFHCSLI
NCEYCEAIEKCPAGEGVVMCDKASDRASCVPCQYGFFSDSLSTEVCKKWTDCKAIGKTEK
QPGSSKTDVVCGLHSPGPTTPWMVVAILSVVIVVSLVVLFLFCCKERMTFLSVNLRTCVQ
NLKRSRNQQETVIPSHCPTGAQTCPLICQEKTPPEMTCPSTVLTINDETSTDQEQDHDRA
DTSSGSSSEDSGSGSASPLSGSSCSCVLSKEPIEVGENEDCSQLVPIGLTTCCSCRTGDA
AGPSTKNVQVISLKEPVVCENCSSEGLRACAGDCVYMQRSQELYLDYSSPAGKDTMSEIR
GDRGRVEGQYRQNEPCCCSIDSTTIPLLPSVSTNDQGLSLIHSNDNKMSDPDADTEYQNQ
CSEAALTSGQVTGNNNTTFISSGQVMNFTGEVIVVYVSQTSLGSGGATEEPFSCPVQEES
NDDSLHSEPKSIPSTSPQAKNEISHSQRHLPVQEVTNDWSCMAKTKN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagactggatttttcagctagctggatatttcaaggatggatcacgcacttggtgctt
gctctgtgcacgcagacaggattggccaaaacctgccgccatcctgagtatgagcacaac
ggagtatgctgcagtaaatgtgaaccaggaaaatatgttttcgaccattgcactggcacc
tcgggcacaaaatgccggggttgtggtcgtgatgagtaccagccggactggagcagtgac
atgaaatgcatccctcagaagttctgcgacgagggtaaaggcttcaaccgcactcgtcca
cacaaccccatagcgcccgaaccctgtcgatgcaaacagggtttccactgttccttaata
aactgcgagtattgcgaggctattgagaaatgccctgctggagaaggagttgtgatgtgt
gacaaagcgtcagacagagcatcctgtgtcccgtgtcagtatggatttttctccgattcc
ttgtcgacagaagtctgcaagaaatggacagactgcaaggccattggcaagactgagaag
cagccgggcagcagtaagacagatgtggtgtgtggactgcattctcccggtcctacgaca
ccctggatggtggtggccatcctctccgtcgtcatcgtggtatctctggtggttcttttt
ctattctgctgtaaggaaaggatgaccttcctctctgtaaatcttcgcacgtgcgtccaa
aacctgaaacgaagcagaaatcaacaggagactgtgataccttcacactgtcctactggt
gcacaaacctgccctctaatttgccaagagaaaacccctccagagatgacgtgtcccagc
accgtgttaaccatcaatgatgaaacctccactgaccaggaacaagaccacgaccgagct
gacacatcatcagggagctccagtgaggattctgggagtggatccgcatccccgctgtca
ggcagctcctgcagttgtgtgctctccaaggaacccatagaggtcggagaaaacgaagac
tgtagtcaactggtacccataggcctgacaacgtgctgctcctgcagaacaggagatgct
gctggtccatcaacaaaaaatgtgcaggtgatcagtttaaaagagcctgtggtatgtgag
aactgctcttccgagggtttgcgtgcttgcgctggcgactgcgtttacatgcagcgctcc
caggaactctacctggactacagcagccctgctggtaaggacaccatgtcggagataaga
ggtgacagaggtcgggtcgagggccaatatagacaaaatgaaccctgttgctgcagcata
gactccaccaccattcctctcttgccgtctgtgagcactaatgaccagggcctttcgctg
atccacagcaatgataataagatgtctgacccggacgcagacacggagtatcagaaccag
tgctcggaagctgctctaacatctggtcaagtgacgggaaacaacaacactacttttatt
tccagcgggcaggtaatgaacttcactggtgaggtcattgtggtgtacgtcagtcagacg
tcactgggcagcggaggggcgacggaggaaccgttcagttgcccggttcaggaggaatct
aatgatgacagccttcatagtgaacccaaatctatcccaagcacatcaccccaggccaag
aacgagatcagccattcacagagacatctgcctgttcaggaagtgaccaatgactggtcc
tgcatggcaaaaacaaagaactga
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