Triplophysa rosa: 130547817
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Entry
130547817 CDS
T09216
Symbol
irf5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
tros
Triplophysa rosa
Pathway
tros04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130547817 (irf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130547817 (irf5)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
130547817 (irf5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
130547817
NCBI-ProteinID:
XP_057180106
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All DBs
Position
LG24:complement(6274541..6281321)
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AA seq
514 aa
AA seq
DB search
MSCQPRRIRLKPWLLAQINSGKYPGLHWLSQERRLFRIPWRHATRHMPTLEEENTIFKAW
ALETGKYQEGVDGPDPAKWKANLRCALNKSREFRLQYDGTKDTPVQPYKIYEVCDQSING
DAGEEEEELTNFINLTIDPRAGEPPSYPAYPPRVDVPFTSIGDGFNPAHRNPPINLLEVV
HNNPNGGGPMTSHLTQPVPPDFTSHGPIKVEQVSYPVHGGGHPNGLGMGSGVIPPPVLQD
VVTHSVGPPDIVDTPMQEVPAQVENQIHPCISELLSSPHMLPLTDLDIKFQYRGRTAGSL
TVSNPQGCRLYYGNLAPTPEQVELFGPVTLHQVLFPGTAEVQNEKQRFYTDHLLDVMDRG
LILEIRGQDIYAIRLCQCKVFWSGPGVLEQGPPNPIEREKKIRVFSLNNFLQDLILYQKG
ETPTPPPFEICFCFGEDWPDRKPKEKKLIIVQVVPVVARILTEMFSGELSWSTDSIRLQI
SNPDLKDQTVEQFKELHRLLQSQNAQATWTQNIH
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtcagccacggaggattcgtctgaagccatggctgctggcacagattaacagc
ggaaagtacccagggttgcactggctcagtcaagagcgcaggctgttccggatcccgtgg
agacatgctacacgtcacatgccaaccttggaagaggagaacacgatttttaaggcttgg
gctctggagacaggcaaataccaggagggagtggacggaccagatccagccaaatggaag
gccaacctccgctgtgcccttaacaaaagccgagagttcagacttcagtatgacggcact
aaagacacccctgtgcaaccctataagatctacgaggtgtgcgaccagtcaatcaatgga
gatgcaggagaagaagaggaggagctgacgaatttcatcaacctcaccattgaccctaga
gccggcgaacctcccagctacccagcgtaccctcccagagtcgacgttccttttacttct
atcggcgatggctttaatcccgcccaccgtaaccctccaatcaacctcttagaagttgtc
cataacaacccaaatggaggtggccctatgacatcacatcttacccagcccgttcctcct
gatttcaccagtcacggtccgatcaaagtggagcaagtgtcgtatcccgttcacggcggc
ggacatccgaacggtctgggaatgggttctggagttatacctccacctgtccttcaagat
gtagtcacccattctgttggcccaccggatatagtggacaccccgatgcaagaggtgcca
gcccaagtggaaaaccagatccatccctgcatctctgaattgctgagcagtcctcacatg
ctgcccttaacggatctcgacatcaagttccaatacaggggacggacagccggttccctt
actgttagtaaccctcaaggttgtagactttactacggtaacctggcacccacaccggag
caggtggaactgttcggcccggtcacgctgcaccaggttctgtttcccggaacggccgag
gtccagaacgagaagcagaggttttacactgatcacttgctggatgtaatggatcgaggg
ctgattctggagatcagaggacaggacatttacgccatcaggttgtgtcagtgtaaagtg
ttctggtccgggccgggtgtgctcgagcagggaccgcccaatccgatagaacgagaaaag
aagattcgggtgttcagcctgaacaacttcctccaggatcttatcctgtatcagaaggga
gagacgcccactcctcctccttttgagatatgcttttgctttggcgaggactggccggac
aggaaaccaaaggagaagaagctcattattgtccaggtcgttccagttgtagcaagaatc
ctaacagagatgttctccggcgagctctcgtggtctacagacagcattaggttgcagatt
tccaaccctgacttgaaagaccagacagtggagcaatttaaagagctccacagactgttg
cagagtcaaaacgctcaagccacctggactcagaacatccactaa
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