Triplophysa rosa: 130548146
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Entry
130548146 CDS
T09216
Symbol
lemd3
Name
(RefSeq) inner nuclear membrane protein Man1
KO
K19410
inner nuclear membrane protein Man1
Organism
tros
Triplophysa rosa
Pathway
tros04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130548146 (lemd3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tros04812
]
130548146 (lemd3)
Cytoskeleton proteins [BR:
tros04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
130548146 (lemd3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSC
LEM
RBM39linker
Motif
Other DBs
NCBI-GeneID:
130548146
NCBI-ProteinID:
XP_057180686
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Position
LG24:complement(5880396..5889322)
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AA seq
869 aa
AA seq
DB search
MCVFRAKMASAQLTDEELFSELKRLGFTPGPVTENTRPVYLKKLKKLREEQPQSRGSRSG
KGRNSTGTISNNGGGSSSGSGNAAARAPGLSARPPGSDVTRRSAGGRPTPNEKRRTDRTG
KFVLGFSSDESDVEAPQKKAGPNLGSASRRDRGSALQTPIRPAGTPAAARRSEHRYSLGL
SVDRKSTSGSPWWATSRIDADGRDYGEPNDNLEETETNSRAINGNKTFYVSSNVSSNSSK
LVKDYSDSDEEEEEGDRDRPRRLTSRHSPPKSSSSSPYISARGSEKTPDFSSLDMVVERK
EGDDKEPMAFRAGFLSHNYPKQSVLFSVDDGNSSPSAFTKNHLDNGDDEPASSSSRFSIG
LRPRFSSYTGLSATYRPNHSNHTGSNHSYSHSSSLKPKHTTVPEDELLQQFKREEVSATG
GFSAHYLSMILLTAACLFFVVLGLMYLRMRGSSISETDAAIKSHPFGPEFDEQYDVKDRD
LILNLLLSLHDYLANVAGEHDCVDPNNPLNRSVSFSEASEYLKLQNEAYEDLIETSLEWI
IKTKDVVGIRLIGVNPDEPIEDVSDISRLESIYPRMSFFCRFRRAFFTVIHRILLILAAI
GVVWGLVYYMKYRWRREEEETRQMYDMVERIIDLMRSHNEASQENKDLQQYLPIPHVRDS
LVQPQDRKKMKRVWDRAVAFLSANESRIRTETQRIGGADFMVWRWLQPSMSPDKMSSIPS
KVWQGKAFPLDRRNSPPNSLTPCLKIRNMFDPIMEEGENWHLAIQEAILEKCSENDGIVH
IAVDKNSREGCVYVKCLSAEHSGKAFKALHGSWFDGKLVTVKYLRLDRYHQRFPQALGCN
TPLKPTSSSMNSMSRLNQRSSTSSSLCFS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtttttcgtgcgaagatggcgtctgcacagctaacggatgaggagcttttctct
gaattaaaacgactcggctttacacccggcccggtgacggagaacacgcgaccggtgtat
ttgaagaaactgaaaaagctgcgagaggagcagccacaatcgcgaggatcccggagcggg
aaagggcgcaacagcaccgggacgatcagcaacaacggcggcggcagtagtagcggtagc
ggtaacgccgcggcgcgagctccgggattaagcgccaggccaccgggcagtgacgtcacg
cgtcggagcgccggcggacgaccgacgccgaacgaaaagcgcaggacagacagaaccgga
aagttcgtgctgggctttagctcggacgagtcggacgtggaggcgcctcagaagaaagca
ggcccgaacctcggcagcgccagcaggagagaccgcggatccgcgttacagacacccatc
aggcccgcgggaacacccgccgccgctcgcaggagcgaacacagatactctctcgggttg
tccgtggacagaaaaagcacatcggggtctccgtggtgggctacgtcccgtatagatgcg
gatggtagagactacggtgagcctaacgacaatttggaagagacggagactaacagccgg
gctataaacgggaataagacgttttacgtgtcgagtaacgttagtagtaatagtagtaag
ctagtcaaggattactccgattccgacgaggaggaggaagagggcgatcgagaccgtccc
cgccgtttaacttccagacacagtccgcctaaatcatcttcctcttccccgtatataagc
gcccggggctcggagaagactccggactttagcagcctagacatggttgtagaacggaag
gagggcgatgataaggaaccgatggcgtttagggcaggcttcctgagccacaactaccca
aaacagtcagtgttgttctccgtggacgacggtaacagcagcccatctgcttttacgaag
aaccacctcgacaacggggatgacgagcccgccagcagcagtagtaggtttagtatcggg
ctaagaccgcggttttcctcttacaccggtctgtctgcgacctaccgaccgaaccactcg
aaccacaccggttcgaaccactcctacagtcattcctcatcccttaagcccaagcacacg
acggtcccggaggacgagctcctgcagcagtttaaacgagaggaggtgtccgccaccggg
ggcttcagcgcgcattacttgtccatgatcctcctgacggccgcctgcttgttcttcgtg
gtcctgggcctcatgtacctgcggatgcggggctccagcatctcagagacggatgctgca
attaagagccacccctttggacctgagtttgatgagcagtatgacgtcaaagacagagac
ctcatcctcaaccttctcctttctctacatgactacctagccaatgtcgcaggagaacac
gattgtgtggatcccaacaatcctttaaacagaagcgtctccttcagcgaagcctccgag
tacctcaagcttcaaaatgaagcctatgaagacttgattgaaacgtctttagaatggatc
attaaaaccaaagatgttgttggaataaggttgattggtgttaaccctgatgaacccata
gaggacgtatcggacatctctcggctggagtccatctacccccgcatgtcctttttctgc
cgcttcagacgggccttcttcaccgtcatccacagaattctcctcatccttgcagccatc
ggtgtagtttggggtttggtctattatatgaaatacagatggcgcagagaagaagaggaa
accaggcagatgtatgacatggtggagaggatcatcgatttaatgaggagccataatgag
gccagtcaggagaacaaggacctgcagcagtacttgcccattcctcacgtccgtgactct
ctggtccagcctcaggacagaaaaaagatgaagagagtatgggacagggctgttgcgttc
ctctcagccaatgagtctcgcattcggacagaaacccagagaattggtggggcagatttc
atggtgtggaggtggcttcaaccctcaatgtcacctgataagatgtccagcattccctcc
aaagtgtggcaaggcaaagcttttccattggaccgaagaaattcaccgccaaacagctta
acgccatgcttaaagattcgcaacatgttcgaccctataatggaagagggggaaaactgg
caccttgccattcaagaagccattttggagaaatgcagcgagaatgatggaatcgttcac
atagctgttgacaaaaactcaagagagggctgtgtttatgtgaagtgcctttcagcagag
cattctgggaaagccttcaaagcacttcatggctcctggtttgatggtaagcttgtaact
gtaaagtacctgcgcctggatcgctaccaccagcgtttcccacaagccctgggctgcaac
acacccctcaagcccaccagctccagcatgaacagcatgtcacgcctgaaccagcgatcc
agcacgtccagctctctgtgtttctcctga
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