Triplophysa rosa: 130548738
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Entry
130548738 CDS
T09216
Name
(RefSeq) platelet-derived growth factor subunit A-like isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
tros
Triplophysa rosa
Pathway
tros04010
MAPK signaling pathway
tros04020
Calcium signaling pathway
tros04510
Focal adhesion
tros04540
Gap junction
tros04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130548738
04020 Calcium signaling pathway
130548738
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130548738
04540 Gap junction
130548738
09142 Cell motility
04810 Regulation of actin cytoskeleton
130548738
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tros04052
]
130548738
00536 Glycosaminoglycan binding proteins [BR:
tros00536
]
130548738
Cytokines and neuropeptides [BR:
tros04052
]
Cytokines
Growth factors (RTK binding)
130548738
Glycosaminoglycan binding proteins [BR:
tros00536
]
Heparan sulfate / Heparin
Growth factors/receptors
130548738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
130548738
NCBI-ProteinID:
XP_057181692
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Position
LG25:6953612..6960177
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AA seq
197 aa
AA seq
DB search
MRTALILFLFCCFYLLSAAAEEAPIPKELIERLSHSEIRSISDLQRILEIDFVENEVVEE
VKQQGHHKEHLYDNRHLKNSLAHSRRKRSIEEAVPAVCKTRTVIYEIPRSQVDPTAANFL
IWPPCVEVKRCSGCCNTSNMRCHPSKKHHRTVKVAKVEYVRRRPKLREVQVQLEDHLECV
CTSKHHSESRMHTADKR
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccgcgttgatcctttttctcttctgctgcttctacctgctttcagcagccgct
gaggaagcgccgattcccaaagaactgatcgagagactctcccacagcgagatccgcagc
atcagcgacctccagcggatcctggagattgacttcgtagagaatgaggtggtggaggaa
gttaaacaacaaggccaccacaaggagcatctttacgacaacagacaccttaagaattca
cttgcacactcaagacgcaagagaagcattgaggaggcagtgccggctgtttgtaagaca
cgcacggtgatctacgagatcccgcggagtcaggtggaccccaccgccgccaacttcctg
atctggcctccatgtgtcgaggtgaaacgatgctcgggctgctgcaacacaagcaacatg
cgctgccatccctccaaaaagcatcacaggactgtgaaggtggccaaggtggagtacgta
cgcagacggccaaagctccgggaggtgcaggtgcagctggaggatcatctcgagtgcgtg
tgcacgtccaaacatcactccgagtcccgcatgcacacggcagataaaaggtga
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